Miyakogusa Predicted Gene

Lj1g3v1788380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1788380.1 tr|A9S7E1|A9S7E1_PHYPA Ctr family transporter
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_1,42.66,8e-19,COPPER TRANSPORTER,NULL; SOLUTE CARRIER
FAMILY 31 (COPPER TRANSPORTERS),Ctr copper transporter;
seg,,CUFF.27949.1
         (433 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65095 similar to UniRef100_A7P4V3 Cluster: Chromosome...   858   0.0  

>gnl|LJGI|TC65095 similar to UniRef100_A7P4V3 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (81%)
          Length = 668

 Score =  858 bits (433), Expect = 0.0
 Identities = 433/433 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgcacatgaccttttactgggggaagaaggtaacaatcctcttcgattcatggaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atgatgcacatgaccttttactgggggaagaaggtaacaatcctcttcgattcatggaaa 119

                                                                       
Query: 61  accgattcatggacgagttacatcctgagtctactcgcgtgcttcatcatcgctgttttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 accgattcatggacgagttacatcctgagtctactcgcgtgcttcatcatcgctgttttc 179

                                                                       
Query: 121 taccaggttctcgagaatcgccgcattcgcctcaagctcttcgccgccgggaagccggtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 taccaggttctcgagaatcgccgcattcgcctcaagctcttcgccgccgggaagccggtt 239

                                                                       
Query: 181 ccgctggagattgaaacccctctcattcgccggaagattgtcggagataaggcgaaggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ccgctggagattgaaacccctctcattcgccggaagattgtcggagataaggcgaaggct 299

                                                                       
Query: 241 ggtgtgaaggttggtggatcgattctgttcggggtgagctcggggatcgggtatctgctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggtgtgaaggttggtggatcgattctgttcggggtgagctcggggatcgggtatctgctc 359

                                                                       
Query: 301 atgctggcggttatgtcgtttaacggtggggtgtttgtggctattgtggtggggcttgcg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgctggcggttatgtcgtttaacggtggggtgtttgtggctattgtggtggggcttgcg 419

                                                                       
Query: 361 tttgggtatttcttcttcaggagtgatggggaagattctgttgtggttgatagttcctgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tttgggtatttcttcttcaggagtgatggggaagattctgttgtggttgatagttcctgc 479

                        
Query: 421 gcttgtgcttgat 433
           |||||||||||||
Sbjct: 480 gcttgtgcttgat 492