Miyakogusa Predicted Gene
- Lj1g3v1788240.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1788240.2 tr|A7ISW5|A7ISW5_SOYBN Copper P1B-ATPase
OS=Glycine max GN=HMA8 PE=2 SV=1,88.61,0,HMA_2,Heavy metal-associated
domain, HMA; ATPase-IB_hvy: heavy metal translocating P-type
AT,ATPase,,CUFF.27940.2
(2655 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS344188 similar to UniRef100_A7ISW5 Cluster: Copper P1... 1126 0.0
gnl|LJGI|TC71418 homologue to UniRef100_A7ISW5 Cluster: Copper P... 886 0.0
gnl|LJGI|BP070707 homologue to UniRef100_A7ISW5 Cluster: Copper ... 222 9e-57
>gnl|LJGI|FS344188 similar to UniRef100_A7ISW5 Cluster: Copper P1B-ATPase; n=1;
Glycine max|Rep: Copper P1B-ATPase - Glycine max
(Soybean), partial (19%)
Length = 593
Score = 1126 bits (568), Expect = 0.0
Identities = 582/589 (98%)
Strand = Plus / Plus
Query: 1 atggctactcatcttctcaggctatctctctccccgcaacctaaactctccttcaattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atggctactcatcttctcaggctatctctctccccgcaacctaaactctccttcaattcc 64
Query: 61 acagccaacaatcatgacctccacttcatttctcttctcccgccgaatcgacgccgcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 acagccaacaatcatgacctccacttcatttctcttctcccgccgaatcgacgccgcaac 124
Query: 121 cgcaacctccaccgccgggaaactctccggccacatctcgccgtatcaaactccttccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cgcaacctccaccgccgggaaactctccggccacatctcgccgtatcaaactccttccag 184
Query: 181 accgagactatctccacggaatcagcagctggtcttccaggccgagcacagggcgaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 accgagactatctccacggaatcagcagctggtcttccaggccgagcacagggcgaagac 244
Query: 241 tcaccggttctactcgacgtaaccgggatgatgtgcggcgcgtgcgtctcccgagtcnnn 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tcaccggttctactcgacgtaaccgggatgatgtgcggcgcgtgcgtctcccgagtcaaa 304
Query: 301 nnnntcttatccgccgacgaccgagttgactcggccgtcgtcaacatgctgaccgatacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aaaatcttatccgccgacgaccgagttgactcggccgtcgtcaacatgctgaccgatacc 364
Query: 361 gcagccgtgaagctgaaaccgctcgaggcggaggtggattcggcgagtgtcgcggagagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gcagccgtgaagctgaaaccgctcgaggcggaggtggattcggcgagtgtcgcggagagc 424
Query: 421 cttgctcggagactgagcgattgcgggtttccggcgaagaggagagcttctggctcggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cttgctcggagactgagcgattgcgggtttccggcgaagaggagagcttctggctcggga 484
Query: 481 gtggcggagagtgtgaggaagtggaaggagatggtgaagaagaaggaggatctggttgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtggcggagagtgtgaggaagtggaaggagatggtgaagaagaaggaggatctggttgct 544
Query: 541 aagagtcggaaccgcgttgctttcgcttggactctggtcgcactgtgct 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aagagtcggaaccgcgttgctttcgcttggactctggtcgcactgtgct 593
>gnl|LJGI|TC71418 homologue to UniRef100_A7ISW5 Cluster: Copper P1B-ATPase; n=1;
Glycine max|Rep: Copper P1B-ATPase - Glycine max
(Soybean), partial (17%)
Length = 724
Score = 886 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 2209 gatttcgtcaaagcatctctggctccacagcagaaatctgaatttatttcttctctgaaa 2268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatttcgtcaaagcatctctggctccacagcagaaatctgaatttatttcttctctgaaa 60
Query: 2269 gctgctgggcatcatgttgcaatggtaggtgatgggataaatgatgcacctgctttggct 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgctgggcatcatgttgcaatggtaggtgatgggataaatgatgcacctgctttggct 120
Query: 2329 gtagctgatgttgggattgctctgcagaatgaagctcaagagaatgctgcctccgatgca 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagctgatgttgggattgctctgcagaatgaagctcaagagaatgctgcctccgatgca 180
Query: 2389 gcatccattatacttctggggaacaaaatttcacaagttgtcgatgcaatagacctagca 2448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatccattatacttctggggaacaaaatttcacaagttgtcgatgcaatagacctagca 240
Query: 2449 cagtcaacaatggcgaaagtgtaccaaaatttgtcttgggcagtagcctataatgttatt 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagtcaacaatggcgaaagtgtaccaaaatttgtcttgggcagtagcctataatgttatt 300
Query: 2509 gccattcccattgctgctggcgtgttacttccccactttgactttgctatgacaccttca 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccattcccattgctgctggcgtgttacttccccactttgactttgctatgacaccttca 360
Query: 2569 ctttcaggaggaatgatggctctgagctccatctttgtggttagcaactcactgcttcta 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctttcaggaggaatgatggctctgagctccatctttgtggttagcaactcactgcttcta 420
Query: 2629 cagctccatgggtctcagacttccaga 2655
|||||||||||||||||||||||||||
Sbjct: 421 cagctccatgggtctcagacttccaga 447
>gnl|LJGI|BP070707 homologue to UniRef100_A7ISW5 Cluster: Copper P1B-ATPase; n=1;
Glycine max|Rep: Copper P1B-ATPase - Glycine max
(Soybean), partial (4%)
Length = 128
Score = 222 bits (112), Expect = 9e-57
Identities = 119/120 (99%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 729 tgatggcttaagcgcgtttaagaaggggtcgccgaatatgaactctctcgtgggatttgg 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tgatggcttaagcgcgtttaagaaggggtcgccgaatatgaactctctcgtgggatttgg 69
Query: 789 ttctgtagctgctttcatcatcagtttgatctcgctattgaaccccgggttggcgtggga 848
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 68 ttctgtagctgctttcatcatcagtttgatctcgctattg-accccgggttggcgtggga 10