Miyakogusa Predicted Gene
- Lj1g3v1788180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1788180.1 Non Chatacterized Hit- tr|I1IFV4|I1IFV4_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,36.26,7e-19,
,CUFF.27931.1
(687 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78182 similar to UniRef100_A7P4T7 Cluster: Chromosome... 1362 0.0
gnl|LJGI|TC66991 similar to UniRef100_A7P4T7 Cluster: Chromosome... 987 0.0
gnl|LJGI|AV773250 similar to UniRef100_A7P4T7 Cluster: Chromosom... 281 3e-75
>gnl|LJGI|TC78182 similar to UniRef100_A7P4T7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1004
Score = 1362 bits (687), Expect = 0.0
Identities = 687/687 (100%)
Strand = Plus / Plus
Query: 1 atggcaaaattgtatcttgtggtcatcctttccttccttcattctgcttctacaggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggcaaaattgtatcttgtggtcatcctttccttccttcattctgcttctacaggttct 140
Query: 61 gctgcaactaatactcaaatcaaagttactaataaccctgcggacaagttggtcgctgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gctgcaactaatactcaaatcaaagttactaataaccctgcggacaagttggtcgctgcg 200
Query: 121 attaatgaaaacagaactgcttacaaggtatcagaattatatgacaacgcggggcttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaatgaaaacagaactgcttacaaggtatcagaattatatgacaacgcggggcttgct 260
Query: 181 tgtatagctctgcaatacatcaaggcataccagggtgattgtggtgctgtgggtggacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtatagctctgcaatacatcaaggcataccagggtgattgtggtgctgtgggtggacca 320
Query: 241 gatgccaagaagcctcctgaatctcaatttgctgaagtttttgccccaaactgcggtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgccaagaagcctcctgaatctcaatttgctgaagtttttgccccaaactgcggtgtt 380
Query: 301 aaggcatcaagtcttgctcctataactggtcgtttcctggggtgccagactaagtatgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggcatcaagtcttgctcctataactggtcgtttcctggggtgccagactaagtatgtc 440
Query: 361 catgcccccgaggcattttccgaagtcctgatacaaaaccagaggagcttagaaatactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgcccccgaggcattttccgaagtcctgatacaaaaccagaggagcttagaaatactc 500
Query: 421 cacagcaagaatcacactcaggttggtgctgctgtgacaggtactgatggggggtctcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacagcaagaatcacactcaggttggtgctgctgtgacaggtactgatggggggtctcct 560
Query: 481 tatttctggtgtgtgctgtttagcggcggcaaacctaacagcacctttgcttttgagggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttctggtgtgtgctgtttagcggcggcaaacctaacagcacctttgcttttgagggc 620
Query: 541 ggcgtggctaaactaacgaaacctggttgctttagcggagctaatgatgagtgcagtggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcgtggctaaactaacgaaacctggttgctttagcggagctaatgatgagtgcagtggt 680
Query: 601 gctcatgattggtcacccctcagtgtgatgtggttatttgctgcttcagttctaattgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctcatgattggtcacccctcagtgtgatgtggttatttgctgcttcagttctaattgca 740
Query: 661 ttggggtttgcttttcctttgtgatca 687
|||||||||||||||||||||||||||
Sbjct: 741 ttggggtttgcttttcctttgtgatca 767
>gnl|LJGI|TC66991 similar to UniRef100_A7P4T7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 744
Score = 987 bits (498), Expect = 0.0
Identities = 540/546 (98%), Gaps = 6/546 (1%)
Strand = Plus / Plus
Query: 1 atggcaaaattgtatcttgtggtcatcctttccttccttcattctgcttctacaggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 atggcaaaattgtatcttgtggtcatcctttccttccttcattctgcttctacaggttct 246
Query: 61 gctgcaactaatactcaaatcaaagttactaataaccctgcggacaagttggtcgctgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gctgcaactaatactcaaatcaaagttactaataaccctgcggacaagttggtcgctgcg 306
Query: 121 attaatgaaaacagaactgcttacaaggtatcagaattatatgacaacgcggggcttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 attaatgaaaacagaactgcttacaaggtatcagaattatatgacaacgcggggcttgct 366
Query: 181 tgtatagctctgcaatacatcaaggcataccagggtgattgtggtgctgtgggtggacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtatagctctgcaatacatcaaggcataccagggtgattgtggtgctgtgggtggacca 426
Query: 241 gatgccaagaagcctcctgaatctcaatttgctgaagtttttgccccaaactgcggtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gatgccaagaagcctcctgaatctcaatttgctgaagtttttgccccaaactgcggtgtt 486
Query: 301 aaggcatcaagtcttgctcctataactggtcgtttcctggggtgccagactaagtatgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaggcatcaagtcttgctcctataactggtcgtttcctggggtgccagactaagtatgtc 546
Query: 361 catgcccccgaggcattttccgaagtcctgatacaaaaccagaggagcttagaaatactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 catgcccccgaggcattttccgaagtcctgatacaaaaccagaggagcttagaaatactc 606
Query: 421 cacagcaagaatcacactcaggttggtgctgctgtgacaggtactgatggggggtctcct 480
||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 607 cacagcaag-atcacactca-gttggtgctgctgtgaca-gtactgatggggggtctcct 663
Query: 481 tatttctggtgtgtgctgtttagcggcggcaaacctaacagcacctttgcttttgagggc 540
|||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||
Sbjct: 664 tatttctggtgtgtgctgtttagcggcggc-aacctaacagca-ctttgc-tttgagggc 720
Query: 541 ggcgtg 546
||||||
Sbjct: 721 ggcgtg 726
>gnl|LJGI|AV773250 similar to UniRef100_A7P4T7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 463
Score = 281 bits (142), Expect = 3e-75
Identities = 210/226 (92%), Gaps = 5/226 (2%)
Strand = Plus / Minus
Query: 467 atggggggtctccttatttctggtgtgtgctgtttagcggcggcaaacctaacagcacct 526
|||||||||||||||||||||||| ||||||||||||||||||| | |||||| || ||
Sbjct: 463 atggggggtctccttatttctggtttgtgctgtttagcggcggccagcctaaccgccccc 404
Query: 527 ttgcttttgagggcggcgtggctaaactaacgaaacctggttgctttagcggagctaatg 586
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 403 tcgcttttgagggcggcgtggctaaacttacgaaacctggttgctttagcggagctaatg 344
Query: 587 atgagtgca-gtggtgctcatgattggtca-cccctcagtgtgatgtggttatttgctgc 644
||||||||| |||||||||||||||||||| |||| | |||||||||||||||||||||
Sbjct: 343 atgagtgcacgtggtgctcatgattggtcaccccccccctgtgatgtggttatttgctgc 284
Query: 645 ttca-gttct-aattgca-ttggggtttgcttttcctttgtgatca 687
|||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 283 ttcacgttctcaattgcacttggggtttgcttttcctttgtgatca 238