Miyakogusa Predicted Gene

Lj1g3v1788140.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1788140.1 Non Chatacterized Hit- tr|D7LA68|D7LA68_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,53.4,2e-19,PsbX,Photosystem II PsbX,CUFF.27929.1
         (373 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64902 similar to UniRef100_A7PE00 Cluster: Chromosome...   739   0.0  
gnl|LJGI|TC69390 similar to UniRef100_A7PE00 Cluster: Chromosome...   611   e-174
gnl|LJGI|TC67203 similar to UniRef100_Q6Q9W1 Cluster: Ultraviole...    62   3e-09

>gnl|LJGI|TC64902 similar to UniRef100_A7PE00 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (66%)
          Length = 734

 Score =  739 bits (373), Expect = 0.0
 Identities = 373/373 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttctgcttcagttccaatggctttgtcactgtcctctgttacccacaacaaactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atggcttctgcttcagttccaatggctttgtcactgtcctctgttacccacaacaaactg 237

                                                                       
Query: 61  aacaacccatcctcccaatcctttttccaaccattacccattagacagaacaagaccctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aacaacccatcctcccaatcctttttccaaccattacccattagacagaacaagaccctc 297

                                                                       
Query: 121 tttgcaaagccaagttcaaaatccaaacatgggattcatgcatctttgaaggagaaggca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tttgcaaagccaagttcaaaatccaaacatgggattcatgcatctttgaaggagaaggca 357

                                                                       
Query: 181 gttgcaggactcacagctgcttccatgactgcttccatggtgattccagaggtggctaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gttgcaggactcacagctgcttccatgactgcttccatggtgattccagaggtggctaat 417

                                                                       
Query: 241 gcagctggaaatgatctcaccccatctctcaagaactttctgctcagcattgcagctggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gcagctggaaatgatctcaccccatctctcaagaactttctgctcagcattgcagctggt 477

                                                                       
Query: 301 ggagttgtgctaacagccatatttgcagcagttattggtgtttccaactttgatcctgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggagttgtgctaacagccatatttgcagcagttattggtgtttccaactttgatcctgtt 537

                        
Query: 361 aagagagcttgaa 373
           |||||||||||||
Sbjct: 538 aagagagcttgaa 550


>gnl|LJGI|TC69390 similar to UniRef100_A7PE00 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (66%)
          Length = 627

 Score =  611 bits (308), Expect = e-174
 Identities = 308/308 (100%)
 Strand = Plus / Plus

                                                                       
Query: 66  cccatcctcccaatcctttttccaaccattacccattagacagaacaagaccctctttgc 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cccatcctcccaatcctttttccaaccattacccattagacagaacaagaccctctttgc 295

                                                                       
Query: 126 aaagccaagttcaaaatccaaacatgggattcatgcatctttgaaggagaaggcagttgc 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aaagccaagttcaaaatccaaacatgggattcatgcatctttgaaggagaaggcagttgc 355

                                                                       
Query: 186 aggactcacagctgcttccatgactgcttccatggtgattccagaggtggctaatgcagc 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aggactcacagctgcttccatgactgcttccatggtgattccagaggtggctaatgcagc 415

                                                                       
Query: 246 tggaaatgatctcaccccatctctcaagaactttctgctcagcattgcagctggtggagt 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tggaaatgatctcaccccatctctcaagaactttctgctcagcattgcagctggtggagt 475

                                                                       
Query: 306 tgtgctaacagccatatttgcagcagttattggtgtttccaactttgatcctgttaagag 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgtgctaacagccatatttgcagcagttattggtgtttccaactttgatcctgttaagag 535

                   
Query: 366 agcttgaa 373
           ||||||||
Sbjct: 536 agcttgaa 543


>gnl|LJGI|TC67203 similar to UniRef100_Q6Q9W1 Cluster: Ultraviolet-B-repressible
           protein; n=1; Gossypium hirsutum|Rep:
           Ultraviolet-B-repressible protein - Gossypium hirsutum
           (Upland cotton) (Gossypium mexicanum), partial (76%)
          Length = 612

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 265 tctctcaagaactttctgctcagcattgcagctggtggagttgtgct 311
           ||||||||||||||  |||||||||| || |||||||||||||||||
Sbjct: 360 tctctcaagaacttcttgctcagcatcgcggctggtggagttgtgct 406