Miyakogusa Predicted Gene
- Lj1g3v1788020.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1788020.2 tr|G7J8D4|G7J8D4_MEDTR Omega-amidase NIT2
OS=Medicago truncatula GN=MTR_3g104850 PE=4 SV=1,86.24,0,seg,NULL;
UPF0012,Uncharacterised protein family UPF0012, conserved site;
Carbon-nitrogen hydrolase,,CUFF.27928.2
(660 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59906 similar to UniRef100_A7P4R6 Cluster: Chromosome... 1269 0.0
gnl|LJGI|BW595157 similar to UniRef100_A7P4R6 Cluster: Chromosom... 408 e-113
gnl|LJGI|TC77738 similar to UniRef100_A7P4R6 Cluster: Chromosome... 107 9e-23
>gnl|LJGI|TC59906 similar to UniRef100_A7P4R6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1524
Score = 1269 bits (640), Expect = 0.0
Identities = 652/656 (99%)
Strand = Plus / Plus
Query: 5 ccgccgctgcaacatcagaacgcgcccgtgcaccacccgccattccaatcccctctcctc 64
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ccgccgccgcaacatcagaacgcgcccgtgcaccacccgccattccaatcccctctcctc 250
Query: 65 ctctcaccaagttcaagatcgccctctgtcaactctccgtctccgccgataaggaccgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ctctcaccaagttcaagatcgccctctgtcaactctccgtctccgccgataaggaccgca 310
Query: 125 acatcgcccacgctcgctccgccattcaccacgccgccgcaaacggcgccaagctcgtcg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acatcgcccacgctcgctccgccattcaccacgccgccgcaaacggcgccaagctcgtcg 370
Query: 185 ttctacccgaaatttggaacagtccttattccaatgacagtttcccaatctacgctgagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttctacccgaaatttggaacagtccttattccaatgacagtttcccaatctacgctgagg 430
Query: 245 atattgatgccggtctcaatgcttctccttcaactgccatgctctctgaactctctcgtc 304
||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 431 atattgatgccggtcacgatgcttctccttcaactgccatgctctctgaactctcccgtc 490
Query: 305 tcttgaaggtcaccatcgttggtggttctatccctgaacgctctggagatcgcttgtaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcttgaaggtcaccatcgttggtggttctatccctgaacgctctggagatcgcttgtaca 550
Query: 365 acacttgctgtgtgtttggaactgatggaaacctaaaagccaagcaccgcaagatacatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acacttgctgtgtgtttggaactgatggaaacctaaaagccaagcaccgcaagatacatc 610
Query: 425 tttttgacattgatatccctgggaagattacttttattgaatccaaaactcttagtgctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tttttgacattgatatccctgggaagattacttttattgaatccaaaactcttagtgctg 670
Query: 485 gggagactccaactattgtggacacagaggttgggcgcattggcatagggatctgttatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gggagactccaactattgtggacacagaggttgggcgcattggcatagggatctgttatg 730
Query: 545 acattcgatttccagaactagcaatgatatatgcagcacgaggtgctcacttgcttttgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 acattcgatttccagaactagcaatgatatatgcagcacgaggtgctcacttgcttttgt 790
Query: 605 atcctggggcatttaacatgacaactggaccattgcattgggagttattgcagagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atcctggggcatttaacatgacaactggaccattgcattgggagttattgcagagg 846
>gnl|LJGI|BW595157 similar to UniRef100_A7P4R6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 486
Score = 408 bits (206), Expect = e-113
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 455 cttttattgaatccaaaactcttagtgctggggagactccaactattgtggacacagagg 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttttattgaatccaaaactcttagtgctggggagactccaactattgtggacacagagg 60
Query: 515 ttgggcgcattggcatagggatctgttatgacattcgatttccagaactagcaatgatat 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggcgcattggcatagggatctgttatgacattcgatttccagaactagcaatgatat 120
Query: 575 atgcagcacgaggtgctcacttgcttttgtatcctggggcatttaacatgacaactggac 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcagcacgaggtgctcacttgcttttgtatcctggggcatttaacatgacaactggac 180
Query: 635 cattgcattgggagttattgcagagg 660
||||||||||||||||||||||||||
Sbjct: 181 cattgcattgggagttattgcagagg 206
>gnl|LJGI|TC77738 similar to UniRef100_A7P4R6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 404
Score = 107 bits (54), Expect = 9e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 607 cctggggcatttaacatgacaactggaccattgcattgggagttattgcagagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cctggggcatttaacatgacaactggaccattgcattgggagttattgcagagg 55