Miyakogusa Predicted Gene
- Lj1g3v1788020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1788020.1 tr|G7J8D4|G7J8D4_MEDTR Omega-amidase NIT2
OS=Medicago truncatula GN=MTR_3g104850 PE=4 SV=1,73.03,0,seg,NULL;
UPF0012,Uncharacterised protein family UPF0012, conserved site;
Carbon-nitrogen hydrolase,,CUFF.27928.1
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59906 similar to UniRef100_A7P4R6 Cluster: Chromosome... 946 0.0
gnl|LJGI|BW595157 similar to UniRef100_A7P4R6 Cluster: Chromosom... 575 e-163
gnl|LJGI|TC77738 similar to UniRef100_A7P4R6 Cluster: Chromosome... 149 4e-35
>gnl|LJGI|TC59906 similar to UniRef100_A7P4R6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1524
Score = 946 bits (477), Expect = 0.0
Identities = 486/489 (99%)
Strand = Plus / Plus
Query: 406 gaaatttggaacagtccttattccaatgacagtttcccaatctacgctgaggatattgat 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaatttggaacagtccttattccaatgacagtttcccaatctacgctgaggatattgat 438
Query: 466 gccggtctcaatgcttctccttcaactgccatgctctctgaactctctcgtctcttgaag 525
||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 439 gccggtcacgatgcttctccttcaactgccatgctctctgaactctcccgtctcttgaag 498
Query: 526 gtcaccatcgttggtggttctatccctgaacgctctggagatcgcttgtacaacacttgc 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtcaccatcgttggtggttctatccctgaacgctctggagatcgcttgtacaacacttgc 558
Query: 586 tgtgtgtttggaactgatggaaacctaaaagccaagcaccgcaagatacatctttttgac 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtgtgtttggaactgatggaaacctaaaagccaagcaccgcaagatacatctttttgac 618
Query: 646 attgatatccctgggaagattacttttattgaatccaaaactcttagtgctggggagact 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 attgatatccctgggaagattacttttattgaatccaaaactcttagtgctggggagact 678
Query: 706 ccaactattgtggacacagaggttgggcgcattggcatagggatctgttatgacattcga 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ccaactattgtggacacagaggttgggcgcattggcatagggatctgttatgacattcga 738
Query: 766 tttccagaactagcaatgatatatgcagcacgaggtgctcacttgcttttgtatcctggg 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tttccagaactagcaatgatatatgcagcacgaggtgctcacttgcttttgtatcctggg 798
Query: 826 gcatttaacatgacaactggaccattgcattgggagttattgcagagggcaagggctatg 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gcatttaacatgacaactggaccattgcattgggagttattgcagagggcaagggctatg 858
Query: 886 gataaccag 894
|||||||||
Sbjct: 859 gataaccag 867
Score = 434 bits (219), Expect = e-121
Identities = 312/346 (90%), Gaps = 12/346 (3%)
Strand = Plus / Plus
Query: 1 atgaaaccatccgcactatcatcactgcagc---tcaccttcaaatctttcaatctccac 57
|||||| ||||||||||||| |||||||||| ||||||||||||| |||||||||||
Sbjct: 40 atgaaagcatccgcactatcgtcactgcagcagctcaccttcaaatccctcaatctccac 99
Query: 58 caccgcactctcactcgcacctctaatctcccctttctctccaccaccaaccgccgaatc 117
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 c---gcactctcactcgcacctctaatctcccctttctctccaccaccaaccgccgaatc 156
Query: 118 cactctnnnnnnnnnnnnnnnnnnnngatcatgtccgccgctgc---aacatcagaacgc 174
|||||| ||||||||||||||| || |||||||||||||
Sbjct: 157 cactcttcctcctcccctcctcc---gatcatgtccgccgccgccgcaacatcagaacgc 213
Query: 175 gcccgtgcaccacccgccattccaatcccctctcctcctctcaccaagttcaagatcgcc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gcccgtgcaccacccgccattccaatcccctctcctcctctcaccaagttcaagatcgcc 273
Query: 235 ctctgtcaactctccgtctccgccgataaggaccgcaacatcgcccacgctcgctccgcc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctctgtcaactctccgtctccgccgataaggaccgcaacatcgcccacgctcgctccgcc 333
Query: 295 attcaccacgccgccgcaaacggcgccaagctcgtcgttctacccg 340
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 attcaccacgccgccgcaaacggcgccaagctcgtcgttctacccg 379
>gnl|LJGI|BW595157 similar to UniRef100_A7P4R6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 486
Score = 575 bits (290), Expect = e-163
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 668 cttttattgaatccaaaactcttagtgctggggagactccaactattgtggacacagagg 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttttattgaatccaaaactcttagtgctggggagactccaactattgtggacacagagg 60
Query: 728 ttgggcgcattggcatagggatctgttatgacattcgatttccagaactagcaatgatat 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggcgcattggcatagggatctgttatgacattcgatttccagaactagcaatgatat 120
Query: 788 atgcagcacgaggtgctcacttgcttttgtatcctggggcatttaacatgacaactggac 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcagcacgaggtgctcacttgcttttgtatcctggggcatttaacatgacaactggac 180
Query: 848 cattgcattgggagttattgcagagggcaagggctatggataaccaggtaatgacccctt 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattgcattgggagttattgcagagggcaagggctatggataaccaggtaatgacccctt 240
Query: 908 tgtcgtttggaacgtccgtggatttttgttgcatatacatattttaatgt 957
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtcgtttggaacgtccgtggatttttgttgcatatacatattttaatgt 290
>gnl|LJGI|TC77738 similar to UniRef100_A7P4R6 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 404
Score = 149 bits (75), Expect = 4e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 820 cctggggcatttaacatgacaactggaccattgcattgggagttattgcagagggcaagg 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cctggggcatttaacatgacaactggaccattgcattgggagttattgcagagggcaagg 61
Query: 880 gctatggataaccag 894
|||||||||||||||
Sbjct: 62 gctatggataaccag 76