Miyakogusa Predicted Gene
- Lj1g3v1787940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1787940.1 Non Chatacterized Hit- tr|I1JU03|I1JU03_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,26.57,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; PPR:
p,CUFF.27919.1
(1563 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS326792 weakly similar to UniRef100_Q5CHL1 Cluster: Hy... 595 e-169
>gnl|LJGI|FS326792 weakly similar to UniRef100_Q5CHL1 Cluster: Hydroxyproline-rich
glycoprotein dz-hrgp; n=1; Cryptosporidium hominis|Rep:
Hydroxyproline-rich glycoprotein dz-hrgp -
Cryptosporidium hominis, partial (3%)
Length = 320
Score = 595 bits (300), Expect = e-169
Identities = 306/308 (99%)
Strand = Plus / Plus
Query: 1 atggccgtggcagtgcggaaagccaccgtgaaaccatcctccattgtaaccaccatcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 atggccgtggcagtgcggaaagccaccgtgaaaccatcctccattgtaaccaccatcacc 72
Query: 61 tccctccttcaaacaccagattctgaacctctgaaaaaattctcatgctacctcactcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tccctccttcaaacaccagattctgaacctctgaaaaaattctcatgctacctcactcca 132
Query: 121 agcttggttacccaagtgatcaagaacacacacaacccccaccatgctctcttcttcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agcttggttacccaagtgatcaagaacacacacaacccccaccatgctctcttcttcttc 192
Query: 181 aactgggcctccaaccctcaacccaaccccaacaactactcccaccctcgctcctgctac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 193 aactgggcctccaaccctcaacccaaccccaacaactactcccaccctcgctcctgttac 252
Query: 241 gccgccatcaccgacgtcttgctttcccactcccttttctccaccgccgactccctcctc 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gctgccatcaccgacgtcttgctttcccactcccttttctccaccgccgactccctcctc 312
Query: 301 cgccgctc 308
||||||||
Sbjct: 313 cgccgctc 320