Miyakogusa Predicted Gene
- Lj1g3v1787630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1787630.1 Non Chatacterized Hit- tr|B9RQT5|B9RQT5_RICCO
WRKY transcription factor, putative OS=Ricinus
communi,48.36,8e-18,WRKY,DNA-binding WRKY; no description,DNA-binding
WRKY; seg,NULL; WRKY DNA-binding domain,DNA-bindin,CUFF.27879.1
(402 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69522 similar to UniRef100_A7P4P4 Cluster: Chromosome... 119 1e-26
gnl|LJGI|GO011819 similar to UniRef100_A7P4P4 Cluster: Chromosom... 111 3e-24
gnl|LJGI|GO009948 similar to UniRef100_A7P4P4 Cluster: Chromosom... 111 3e-24
>gnl|LJGI|TC69522 similar to UniRef100_A7P4P4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 684
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 321 actggatgatgggttcaagtggagaaagtatggaaagaagatggtgaaaaacagtcccaa 380
||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 507 actggatgatgggttcaagtggagaaagtatggaaagaagatggtgaaaaaaaatctcaa 566
Query: 381 tccaaggtatatatgc 396
||||| ||||||||||
Sbjct: 567 tccaaagtatatatgc 582
>gnl|LJGI|GO011819 similar to UniRef100_A7P4P4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 657
Score = 111 bits (56), Expect = 3e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 288 agtttcattcaaaaccaagtcagaggttgaaatactggatgatgggttcaagtggagaaa 347
|||| |||||||||| |||||||| ||||||||||| ||||||||||||| ||||| ||
Sbjct: 286 agttgcattcaaaacaaagtcagaagttgaaatactaaatgatgggttcaaatggaggaa 345
Query: 348 gtatggaaagaagatggtgaaaaacagtcccaatccaagg 387
|||||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 346 gtatggcaagaaaatggtgaagaacagccccaatccaagg 385
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 180 tcaaaccaatcaagtaggtgactttggaggaagtagcagcaatgttgaggggtcttc 236
|||| ||||| |||||||||| ||||||||| || ||||||| |||||||||||||
Sbjct: 190 tcaagccaatgaagtaggtgattttggaggaggtggcagcaactttgaggggtcttc 246
>gnl|LJGI|GO009948 similar to UniRef100_A7P4P4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 625
Score = 111 bits (56), Expect = 3e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 288 agtttcattcaaaaccaagtcagaggttgaaatactggatgatgggttcaagtggagaaa 347
|||| |||||||||| |||||||| ||||||||||| ||||||||||||| ||||| ||
Sbjct: 141 agttgcattcaaaacaaagtcagaagttgaaatactaaatgatgggttcaaatggaggaa 200
Query: 348 gtatggaaagaagatggtgaaaaacagtcccaatccaagg 387
|||||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 201 gtatggcaagaaaatggtgaagaacagccccaatccaagg 240