Miyakogusa Predicted Gene
- Lj1g3v1787540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1787540.1 tr|F2EFI6|F2EFI6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,34.19,1e-17,Pkinase,Protein kinase, catalytic domain; Usp,UspA;
Protein kinase-like (PK-like),Protein kinase-lik,CUFF.27877.1
(2142 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65557 similar to UniRef100_A7P4N4 Cluster: Chromosome... 1090 0.0
gnl|LJGI|TC80720 similar to UniRef100_A7P6N6 Cluster: Chromosome... 315 6e-85
gnl|LJGI|FS343431 248 1e-64
gnl|LJGI|TC69863 similar to UniRef100_A7Q5A1 Cluster: Chromosome... 58 2e-07
>gnl|LJGI|TC65557 similar to UniRef100_A7P4N4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 688
Score = 1090 bits (550), Expect = 0.0
Identities = 550/550 (100%)
Strand = Plus / Plus
Query: 1 atgtcctccggcgctccgccgcagcagccaactggcgcttcaccgcacaacatcacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atgtcctccggcgctccgccgcagcagccaactggcgcttcaccgcacaacatcacaatg 198
Query: 61 gtcgctgttgacaaagacaagaacagtgcctacgccttccgttgggcggttaatcatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gtcgctgttgacaaagacaagaacagtgcctacgccttccgttgggcggttaatcatctc 258
Query: 121 gaaaaccctctcatcatcgccgtccatgtcaagcataaaaactttcctaatcatcatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gaaaaccctctcatcatcgccgtccatgtcaagcataaaaactttcctaatcatcatgtc 318
Query: 181 accaatgtgtttccacctgacgaggaggatgtagcctatgttttcaataacttgcgtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 accaatgtgtttccacctgacgaggaggatgtagcctatgttttcaataacttgcgtgga 378
Query: 241 ttgtgtaatcggaaagctatcacggtgaaagaagcggtagttgatgatcatgatgttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttgtgtaatcggaaagctatcacggtgaaagaagcggtagttgatgatcatgatgttgtg 438
Query: 301 agaggacttttagaatttgcaaaaaggaatctcatacaaagtattgtcgtcggtgcatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaggacttttagaatttgcaaaaaggaatctcatacaaagtattgtcgtcggtgcatcc 498
Query: 361 accaagaactctttgacaagtctaaagaaattgaaaggtaatcatgatataccaacggcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 accaagaactctttgacaagtctaaagaaattgaaaggtaatcatgatataccaacggcc 558
Query: 421 atgataaaagtggccccggattattgcaatgtgtacataatttctaaactcaagattatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atgataaaagtggccccggattattgcaatgtgtacataatttctaaactcaagattatg 618
Query: 481 tcagctcgatcggcgatgcgacagtttgttactccaaaacaacaagcttttcaggcaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcagctcgatcggcgatgcgacagtttgttactccaaaacaacaagcttttcaggcaagc 678
Query: 541 ctacctggtg 550
||||||||||
Sbjct: 679 ctacctggtg 688
>gnl|LJGI|TC80720 similar to UniRef100_A7P6N6 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (3%)
Length = 853
Score = 315 bits (159), Expect = 6e-85
Identities = 162/163 (99%)
Strand = Plus / Plus
Query: 1980 gagctgtgcagaactcagtaagaaggacaggccgaatctcgcaacagttgttttgccaga 2039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctgtgcagaactcagtaagaaggacaggccgaatctcgcaacagttgttttgccaga 60
Query: 2040 gcttaaccgattaagagactttgaaagtactttagaccatcaagaagttattagcagtga 2099
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 gcttaaccgattaagagactttgaaagtactttagaccatccagaagttattagcagtga 120
Query: 2100 tgataacgaccatagccatgaagcacgccctttctactgctaa 2142
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgataacgaccatagccatgaagcacgccctttctactgctaa 163
>gnl|LJGI|FS343431
Length = 426
Score = 248 bits (125), Expect = 1e-64
Identities = 128/129 (99%)
Strand = Plus / Plus
Query: 47 acaacatcacaatggtcgctgttgacaaagacaagaacagtgcctacgccttccgttggg 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaacatcacaatggtcgctgttgacaaagacaagaacagtgcctacgccttccgttggg 60
Query: 107 cggttaatcatctcgaaaaccctctcatcatcgccgtccatgtcaagcataaaaactttc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 cggttaatcatctcgaaaaccctctcatcatcgccgtccatgtcaagcataaaaattttc 120
Query: 167 ctaatcatc 175
|||||||||
Sbjct: 121 ctaatcatc 129
>gnl|LJGI|TC69863 similar to UniRef100_A7Q5A1 Cluster: Chromosome undetermined
scaffold_52, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_52, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(52%)
Length = 1669
Score = 58.0 bits (29), Expect = 2e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 1429 cttggtgcctgtcctgaacacgggtgcttggtgtatgaatacatggacaatggtagctta 1488
|||||||| |||||||| || || ||| | ||||||||||| ||||| |||||||||||
Sbjct: 428 cttggtgcatgtcctgatcatggatgccttgtgtatgaatatatggagaatggtagcttg 487
Query: 1489 gagga 1493
|||||
Sbjct: 488 gagga 492