Miyakogusa Predicted Gene

Lj1g3v1787470.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1787470.1 tr|G7J7N6|G7J7N6_MEDTR ATP-dependent zinc
metalloprotease FtsH OS=Medicago truncatula GN=ftsH PE=3
S,56.34,0.00000000003,AAA,ATPase, AAA-type, conserved site; ATPases
associated with a variety of cellula,AAA+ ATPase domai,CUFF.27867.1
         (951 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like...   751   0.0  
gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromoso...   301   4e-81

>gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
           sativum|Rep: FtsH-like protease - Pisum sativum (Garden
           pea), partial (21%)
          Length = 815

 Score =  751 bits (379), Expect = 0.0
 Identities = 423/431 (98%), Gaps = 5/431 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaattgaatgaagaagtgcagcccaatgtggagtcaagtactaaatttagtgacgta 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgaaattgaatgaagaagtacagcccaatgtggagtcaagtactaaatttagtgacgta 442

                                                                       
Query: 61  ataggaggtattgatgaggcaaaggcaaaactgaaagaaattgtgcactacctccgagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ataggaggtattgatgaggcaaaggcaaaactgaaagaaattgtgcactacctccgagat 502

                                                                       
Query: 121 cctaagttctttactcgtcttggtaggaagttcccaaagggttttttgctagttggcccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctaagttctttactcgtcttggtaggaagttcccaaagggttttttgctagttggcccg 562

                                                                       
Query: 181 cctgacacgggtaaaacgatgttgtcaaaagctgttgctggtgaggttggggttcctttc 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cctgacgcgggtaaaacgatgttgtcaaaagctgttgctggtgaggttggggttcctttc 622

                                                                       
Query: 241 ttctcatgcagtggaagtgaatttgatgataagtttgctggcgcacgaaagatgagtgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttctcatgcagtggaagtgaatttgatgataagtttgctggcgcacgaaagatgagtgat 682

                                                                       
Query: 301 ctttttgctgctgcaaaaaagcggccaccttgtattatcttcattgatgctatcgatgcg 360
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctttttgctgctgc-acaaagcggccaccttgtattatcttcattgatgctatcgatgcg 741

                                                                       
Query: 361 attggagcaggtcaaaataagttgcttgttgagattgatggagtcaagcaaaatgatggg 420
           ||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 742 attggagca-gtc-aaataagttgcttgttgaga-tgatggagtcaagc-aaatgatggg 797

                      
Query: 421 ataattgtgat 431
           |||||||||||
Sbjct: 798 ataattgtgat 808


>gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (32%)
          Length = 483

 Score =  301 bits (152), Expect = 4e-81
 Identities = 274/317 (86%)
 Strand = Plus / Plus

                                                                       
Query: 399 tggagtcaagcaaaatgatgggataattgtgattgcagctactaatgttccagagtcaat 458
           |||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |
Sbjct: 3   tggattcaagcaaaatgatggcataattgtgattgcagctactaattttccagagtcatt 62

                                                                       
Query: 459 agataaggctttgatgagacatgggcgatttgatcactatgcctttgttcccaaaccatg 518
           ||||||||||||  | |||| |||||||||||||| | ||| | |||||||||| |||  
Sbjct: 63  agataaggctttagtaagacctgggcgatttgatcgccatgtcgttgttcccaatccaga 122

                                                                       
Query: 519 tgtagaagcaaggcgacagattttggaatctcacatgtcaaaggtcctgaaggctgatga 578
           |||||||| |||||| |||||| | |||||||||||||||||||| ||||||||||||||
Sbjct: 123 tgtagaaggaaggcgtcagattctagaatctcacatgtcaaaggttctgaaggctgatga 182

                                                                       
Query: 579 tgtcgatttaatgatcattactnnnnnnncaaatgggttctctggtgctgaccttgcaaa 638
           ||| ||| ||||||||||| ||       ||  |||||||||||||||||||||||||||
Sbjct: 183 tgttgatctaatgatcattgctcgaggaacacctgggttctctggtgctgaccttgcaaa 242

                                                                       
Query: 639 catggttcatcttgcgactcttgaagctgcaacggatggtgccaaagttgtgaccatgaa 698
           ||||||| || ||||| ||||| | ||||||| |||||||||||||| ||||| |||| |
Sbjct: 243 catggttaatattgcggctcttaaggctgcaatggatggtgccaaagctgtgagcatgca 302

                            
Query: 699 ctatttagagtttgcga 715
             |||||||||||||||
Sbjct: 303 tgatttagagtttgcga 319