Miyakogusa Predicted Gene
- Lj1g3v1786340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1786340.1 tr|I1HFR6|I1HFR6_BRADI ATP-dependent zinc
metalloprotease FtsH OS=Brachypodium distachyon
GN=BRADI2G,41.13,1e-18,METALLOPROTEASE M41 FTSH,NULL; AAA,ATPase,
AAA-type, core; ATPases associated with a variety of cell,CUFF.27855.1
(897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318436 similar to UniRef100_Q6KC90 Cluster: FtsH-like... 375 e-103
gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like... 363 1e-99
gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromoso... 127 1e-28
>gnl|LJGI|FS318436 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (27%)
Length = 744
Score = 375 bits (189), Expect = e-103
Identities = 316/357 (88%), Gaps = 6/357 (1%)
Strand = Plus / Plus
Query: 16 ttgataacgcaggctacaaggcatcaatcagaatttggaaagctcaaaaatttgttagct 75
||||||||||||| |||||| ||||||||||||||||||| | ||||||||||||| |||
Sbjct: 179 ttgataacgcaggttacaagacatcaatcagaatttggaatggtcaaaaatttgttggct 238
Query: 76 agaagctataatttgtctgttaacaagtttgaaggctttaaagggaataggctttgctgt 135
||||||||| ||||| | ||| ||||||| |||||||| | |||||||||||||| |
Sbjct: 239 agaagctat---ttgtccgctaataagtttggaggctttacaaggaataggctttgccgc 295
Query: 136 tctcaggagagattccaatcaagctatgttggtaatctggcttgtcaagggcgtgaagca 195
|| |||||||||||||||||||||||||||||||||||||| ||| || ||||| |||
Sbjct: 296 tcccaggagagattccaatcaagctatgttggtaatctggcccgtcgagcacgtgatgca 355
Query: 196 gataaagctagtgaagttg---atcttaaagaacttaaccatcgaaatgatgctgaagct 252
||| |||| |||||||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 356 gatgaagccagtgaagttgctcatcttaaagaactttaccatcgaaatgatcctgaagct 415
Query: 253 gtgataagagcatttgaatgtcagccatctctacatgctaatccttcagcggtttctgaa 312
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtgattagagcatttgaaagtcagccatctctacatgctaatccttcagcggtttctgaa 475
Query: 313 tatgttaaagcattggtgaaagttgatagcctggatgaaagtgaattattgaagact 369
||||||||||| | |||| || || || |||||||||||||||||| ||||||||
Sbjct: 476 tatgttaaagccctagtgagagctgggaggctggatgaaagtgaattagtgaagact 532
>gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (21%)
Length = 815
Score = 363 bits (183), Expect = 1e-99
Identities = 444/529 (83%), Gaps = 19/529 (3%)
Strand = Plus / Plus
Query: 237 aaatgatgctgaagctgtgataagagcatttgaatgtcagccatctctacatgctaatcc 296
||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 229 aaatgatcctgaagctgtgatcagagcatttgaaagtcagccatctctacatgctaaccc 288
Query: 297 ttcagcggtttctgaatatgttaaagcattggtgaaagttgatagc---ctggatgaaag 353
| |||| | || ||| |||||||||||||||||| |||||||| ||||||| |||
Sbjct: 289 tggagcgtctgctcaatgggttaaagcattggtgaaacttgatagcaggctggatggaag 348
Query: 354 tgaattattgaagactttgcatagaggacttggtatgaa------tgaagaagtgcagcc 407
||||||| | ||||||| || | ||||||||||||||| ||||||||| |||||
Sbjct: 349 tgaattactcaagacttggccaacaggacttggtatgaaattgaatgaagaagtacagcc 408
Query: 408 cggtgtggagtcaagtactaaatttagtgacataaaaggtg---ttgatgaggcaaaagg 464
| |||||||||||||||||||||||||||| ||| ||| | ||||||||||||| |
Sbjct: 409 caatgtggagtcaagtactaaatttagtgacgtaataggaggtattgatgaggcaaaggc 468
Query: 465 agaactggaagaaattgttcactacttccgggatcctaagttctatactcgtcttggtgc 524
| ||||| |||||||||| |||||| |||| ||||||||||||| |||||||||||||
Sbjct: 469 aaaactgaaagaaattgtgcactacctccgagatcctaagttctttactcgtcttggtag 528
Query: 525 gaagttcccaaaatgttttttgcttgctggcccgtctggcaatggtaaaacgatgttggc 584
|||||||||||| |||||||||| | ||||||| ||| | ||||||||||||||| |
Sbjct: 529 gaagttcccaaagggttttttgctagttggcccgcctgacgcgggtaaaacgatgttgtc 588
Query: 585 aacagctgttgctggagaggctggggttcctttcttctcatgcagtggacgtgaatttaa 644
|| |||||||||||| |||| |||||||||||||||||||||||||||| |||||||| |
Sbjct: 589 aaaagctgttgctggtgaggttggggttcctttcttctcatgcagtggaagtgaatttga 648
Query: 645 aggaatgtctgttggggctggcgcacgaaggatgaaggatctctttgctgctgcaaaaaa 704
| | || | ||||||||||||| ||||| ||||| ||||||||||| | |||
Sbjct: 649 tgataagttt------gctggcgcacgaaagatgagtgatctttttgctgctgc-acaaa 701
Query: 705 gcggtcaccttgtataatcttcattgatgagatcgatgctattggagca 753
|||| |||||||||| ||||||||||||| |||||||| |||||||||
Sbjct: 702 gcggccaccttgtattatcttcattgatgctatcgatgcgattggagca 750
Score = 65.9 bits (33), Expect = 4e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 10 aggcgtttgataacgcaggctacaaggcatcaatcagaatttggaaagctcaa 62
|||||||||||| ||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 71 aggcgtttgatactgcaggttacaaggcttcaatcagaatttggaaaggtcaa 123
>gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 483
Score = 127 bits (64), Expect = 1e-28
Identities = 94/104 (90%)
Strand = Plus / Plus
Query: 783 tggactcaagcaaaacgatggcataattgtgattgcagctactaatgttccaacgtcact 842
|||| |||||||||| |||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 3 tggattcaagcaaaatgatggcataattgtgattgcagctactaattttccagagtcatt 62
Query: 843 agataaggccttggtaaaacctggtcgatttgatcgccatgtcg 886
||||||||| || |||| |||||| |||||||||||||||||||
Sbjct: 63 agataaggctttagtaagacctgggcgatttgatcgccatgtcg 106