Miyakogusa Predicted Gene
- Lj1g3v1786070.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1786070.3 tr|G7J7N5|G7J7N5_MEDTR ATP-dependent zinc
metalloprotease FtsH OS=Medicago truncatula GN=ftsH PE=3
S,86.92,0,P-loop containing nucleoside triphosphate hydrolases,NULL;
FtsH protease domain-like,NULL; FtsH,Pept,CUFF.27878.3
(2091 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318436 similar to UniRef100_Q6KC90 Cluster: FtsH-like... 1106 0.0
gnl|LJGI|TC70208 similar to UniRef100_Q6KC90 Cluster: FtsH-like ... 1033 0.0
gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromoso... 946 0.0
gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like... 307 2e-82
gnl|LJGI|AV410480 homologue to UniRef100_A7QB63 Cluster: Chromos... 56 9e-07
>gnl|LJGI|FS318436 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (27%)
Length = 744
Score = 1106 bits (558), Expect = 0.0
Identities = 558/558 (100%)
Strand = Plus / Plus
Query: 3 gcaggttacaagacatcaatcagaatttggaatggtcaaaaatttgttggctagaagcta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gcaggttacaagacatcaatcagaatttggaatggtcaaaaatttgttggctagaagcta 246
Query: 63 tttgtccgctaataagtttggaggctttacaaggaataggctttgccgctcccaggagag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttgtccgctaataagtttggaggctttacaaggaataggctttgccgctcccaggagag 306
Query: 123 attccaatcaagctatgttggtaatctggcccgtcgagcacgtgatgcagatgaagccag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 attccaatcaagctatgttggtaatctggcccgtcgagcacgtgatgcagatgaagccag 366
Query: 183 tgaagttgctcatcttaaagaactttaccatcgaaatgatcctgaagctgtgattagagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgaagttgctcatcttaaagaactttaccatcgaaatgatcctgaagctgtgattagagc 426
Query: 243 atttgaaagtcagccatctctacatgctaatccttcagcggtttctgaatatgttaaagc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atttgaaagtcagccatctctacatgctaatccttcagcggtttctgaatatgttaaagc 486
Query: 303 cctagtgagagctgggaggctggatgaaagtgaattagtgaagactctgataagaggtat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cctagtgagagctgggaggctggatgaaagtgaattagtgaagactctgataagaggtat 546
Query: 363 tccgaaatcagggagagaggaagacagtttgggtgccttttcagctcttagaaatgtggg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tccgaaatcagggagagaggaagacagtttgggtgccttttcagctcttagaaatgtggg 606
Query: 423 aaaatctacaaaagatggaattcttggaactccaggttatcctattcatatggtggctgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aaaatctacaaaagatggaattcttggaactccaggttatcctattcatatggtggctgc 666
Query: 483 agaaggtgggaattttaaagagcagctatggcgtacaattaggtctgttgtagtggtctt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 agaaggtgggaattttaaagagcagctatggcgtacaattaggtctgttgtagtggtctt 726
Query: 543 cctcttgatttctggtgt 560
||||||||||||||||||
Sbjct: 727 cctcttgatttctggtgt 744
>gnl|LJGI|TC70208 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (28%)
Length = 838
Score = 1033 bits (521), Expect = 0.0
Identities = 521/521 (100%)
Strand = Plus / Plus
Query: 1485 ggcaactatagttccccggggtatggctcttggcatggttactcaattgcctgaagttga 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaactatagttccccggggtatggctcttggcatggttactcaattgcctgaagttga 60
Query: 1545 tcagaccagtacgtcccgcaaacagatgcttgcccgactagatgtctgcatgggtggccg 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagaccagtacgtcccgcaaacagatgcttgcccgactagatgtctgcatgggtggccg 120
Query: 1605 ggttgctgaagagttgatttttggagaaagtgaagtaacttcaggtgcatcctcagatct 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttgctgaagagttgatttttggagaaagtgaagtaacttcaggtgcatcctcagatct 180
Query: 1665 ttctcatgcaactaaactggctagggcaatggttactcaatatggtatgagcagtgaagt 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctcatgcaactaaactggctagggcaatggttactcaatatggtatgagcagtgaagt 240
Query: 1725 tggacttgccactcacaattacaatgacgatgggagaagcatgagctcagaaactaggct 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggacttgccactcacaattacaatgacgatgggagaagcatgagctcagaaactaggct 300
Query: 1785 gcttattgagaaagaggtgaggaacttgcttgagagggcttataccaatgcaaaaactat 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcttattgagaaagaggtgaggaacttgcttgagagggcttataccaatgcaaaaactat 360
Query: 1845 tctaaccacccatgataaggagcttcaggcacttgcaaatgctcttctagagcatgagac 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctaaccacccatgataaggagcttcaggcacttgcaaatgctcttctagagcatgagac 420
Query: 1905 acttacaggaagtcagataaacgctttacttgctaaagttaactcccagcagcagcaaca 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acttacaggaagtcagataaacgctttacttgctaaagttaactcccagcagcagcaaca 480
Query: 1965 gccacaagtagttgaaactcagggcagttcacggtccaatc 2005
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccacaagtagttgaaactcagggcagttcacggtccaatc 521
Score = 60.0 bits (30), Expect = 6e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 2058 caaggctcaaggtgttgccccagttggatcttag 2091
||||||||||||||||||||||||||||| ||||
Sbjct: 574 caaggctcaaggtgttgccccagttggattttag 607
>gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 483
Score = 946 bits (477), Expect = 0.0
Identities = 480/481 (99%)
Strand = Plus / Plus
Query: 1035 tggattcaagcaaaatgatggcataattgtgattgcagctactaattttccagagtcatt 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tggattcaagcaaaatgatggcataattgtgattgcagctactaattttccagagtcatt 62
Query: 1095 agataaggctttggtaagacctgggcgatttgatcgccatgtcgttgttcccaatccaga 1154
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agataaggctttagtaagacctgggcgatttgatcgccatgtcgttgttcccaatccaga 122
Query: 1155 tgtagaaggaaggcgtcagattctagaatctcacatgtcaaaggttctgaaggctgatga 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgtagaaggaaggcgtcagattctagaatctcacatgtcaaaggttctgaaggctgatga 182
Query: 1215 tgttgatctaatgatcattgctcgaggaacacctgggttctctggtgctgaccttgcaaa 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgttgatctaatgatcattgctcgaggaacacctgggttctctggtgctgaccttgcaaa 242
Query: 1275 catggttaatattgcggctcttaaggctgcaatggatggtgccaaagctgtgagcatgca 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 catggttaatattgcggctcttaaggctgcaatggatggtgccaaagctgtgagcatgca 302
Query: 1335 tgatttagagtttgcgaaggataagattatgatgggaagtgaacgcaagtcggctgttat 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgatttagagtttgcgaaggataagattatgatgggaagtgaacgcaagtcggctgttat 362
Query: 1395 atctgatgagtcgagaaagatgactgctttccacgagggtggccacgccttggtggcaat 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atctgatgagtcgagaaagatgactgctttccacgagggtggccacgccttggtggcaat 422
Query: 1455 tcatactgatggagcgcttcctgttcacaaggcaactatagttccccggggtatggctct 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tcatactgatggagcgcttcctgttcacaaggcaactatagttccccggggtatggctct 482
Query: 1515 t 1515
|
Sbjct: 483 t 483
>gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (21%)
Length = 815
Score = 307 bits (155), Expect = 2e-82
Identities = 316/368 (85%), Gaps = 10/368 (2%)
Strand = Plus / Plus
Query: 605 tgaatgaggaagtgcagcccagtgtggagacaagtactaaatttagtgacgtaaaaggtg 664
||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||| ||| |
Sbjct: 390 tgaatgaagaagtacagcccaatgtggagtcaagtactaaatttagtgacgtaataggag 449
Query: 665 ---ttgatgaggcaaaggcagaactggaagaaattgttcactacctccgagatcctaagc 721
||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||
Sbjct: 450 gtattgatgaggcaaaggcaaaactgaaagaaattgtgcactacctccgagatcctaagt 509
Query: 722 gctttactcgtcttggtggcaagctccccaaaggggttttgcttgttggcccgcctggca 781
|||||||||||||||| | ||| |||| || || ||||||| ||||||||||||| |
Sbjct: 510 tctttactcgtcttggtaggaagttcccaaagggttttttgctagttggcccgcctgacg 569
Query: 782 cgggtaaaacaatgttggcaagagctattgctggagaggctggggttcctttcttctcat 841
|||||||||| |||||| ||| |||| ||||||| |||| ||||||||||||||||||||
Sbjct: 570 cgggtaaaacgatgttgtcaaaagctgttgctggtgaggttggggttcctttcttctcat 629
Query: 842 gcagtggaagtgaatttgaagagatgtttgttggtgttggtgcacgaagggtgagggatc 901
||||||||||||||||||| || | ||| || ||| ||||||| | |||| ||||
Sbjct: 630 gcagtggaagtgaatttgatgataagtt------tgctggcgcacgaaagatgagtgatc 683
Query: 902 tttttactgctgcaaaaaagcggtcaccttgtataatcttcattgatgagatcgatgcca 961
||||| ||||||| | ||||||| |||||||||| ||||||||||||| |||||||| |
Sbjct: 684 tttttgctgctgc-acaaagcggccaccttgtattatcttcattgatgctatcgatgcga 742
Query: 962 ttggagca 969
||||||||
Sbjct: 743 ttggagca 750
Score = 105 bits (53), Expect = 1e-21
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 216 aaatgatcctgaagctgtgattagagcatttgaaagtcagccatctctacatgctaa 272
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 229 aaatgatcctgaagctgtgatcagagcatttgaaagtcagccatctctacatgctaa 285
Score = 56.0 bits (28), Expect = 9e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 2 tgcaggttacaagacatcaatcagaatttggaatggtcaa 41
||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 84 tgcaggttacaaggcttcaatcagaatttggaaaggtcaa 123
Score = 56.0 bits (28), Expect = 9e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 124 ttccaatcaagctatgttggtaatctggcccgtcgagcacgtgatgcagatgaagc 179
||||||||||| ||||||||| ||||||| || |||| |||||| ||||||||||
Sbjct: 164 ttccaatcaagttatgttggtgatctggctcgccgagtacgtgaaacagatgaagc 219
>gnl|LJGI|AV410480 homologue to UniRef100_A7QB63 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 420
Score = 56.0 bits (28), Expect = 9e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 926 caccttgtataatcttcattgatgagatcgatgccattgg 965
|||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 306 caccttctataatctttattgatgagatagatgccattgg 345