Miyakogusa Predicted Gene
- Lj1g3v1786070.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1786070.2 tr|G7J7N5|G7J7N5_MEDTR ATP-dependent zinc
metalloprotease FtsH OS=Medicago truncatula GN=ftsH PE=3
S,86.92,0,P-loop containing nucleoside triphosphate hydrolases,NULL;
FtsH protease domain-like,NULL; FtsH,Pept,CUFF.27878.2
(2112 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318436 similar to UniRef100_Q6KC90 Cluster: FtsH-like... 1152 0.0
gnl|LJGI|TC70208 similar to UniRef100_Q6KC90 Cluster: FtsH-like ... 1033 0.0
gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromoso... 946 0.0
gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like... 307 2e-82
gnl|LJGI|AV410480 homologue to UniRef100_A7QB63 Cluster: Chromos... 56 9e-07
>gnl|LJGI|FS318436 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (27%)
Length = 744
Score = 1152 bits (581), Expect = 0.0
Identities = 581/581 (100%)
Strand = Plus / Plus
Query: 1 atggcgtggaggcacttgataacgcaggttacaagacatcaatcagaatttggaatggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atggcgtggaggcacttgataacgcaggttacaagacatcaatcagaatttggaatggtc 223
Query: 61 aaaaatttgttggctagaagctatttgtccgctaataagtttggaggctttacaaggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aaaaatttgttggctagaagctatttgtccgctaataagtttggaggctttacaaggaat 283
Query: 121 aggctttgccgctcccaggagagattccaatcaagctatgttggtaatctggcccgtcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aggctttgccgctcccaggagagattccaatcaagctatgttggtaatctggcccgtcga 343
Query: 181 gcacgtgatgcagatgaagccagtgaagttgctcatcttaaagaactttaccatcgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gcacgtgatgcagatgaagccagtgaagttgctcatcttaaagaactttaccatcgaaat 403
Query: 241 gatcctgaagctgtgattagagcatttgaaagtcagccatctctacatgctaatccttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gatcctgaagctgtgattagagcatttgaaagtcagccatctctacatgctaatccttca 463
Query: 301 gcggtttctgaatatgttaaagccctagtgagagctgggaggctggatgaaagtgaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gcggtttctgaatatgttaaagccctagtgagagctgggaggctggatgaaagtgaatta 523
Query: 361 gtgaagactctgataagaggtattccgaaatcagggagagaggaagacagtttgggtgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gtgaagactctgataagaggtattccgaaatcagggagagaggaagacagtttgggtgcc 583
Query: 421 ttttcagctcttagaaatgtgggaaaatctacaaaagatggaattcttggaactccaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttttcagctcttagaaatgtgggaaaatctacaaaagatggaattcttggaactccaggt 643
Query: 481 tatcctattcatatggtggctgcagaaggtgggaattttaaagagcagctatggcgtaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tatcctattcatatggtggctgcagaaggtgggaattttaaagagcagctatggcgtaca 703
Query: 541 attaggtctgttgtagtggtcttcctcttgatttctggtgt 581
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 attaggtctgttgtagtggtcttcctcttgatttctggtgt 744
>gnl|LJGI|TC70208 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (28%)
Length = 838
Score = 1033 bits (521), Expect = 0.0
Identities = 521/521 (100%)
Strand = Plus / Plus
Query: 1506 ggcaactatagttccccggggtatggctcttggcatggttactcaattgcctgaagttga 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaactatagttccccggggtatggctcttggcatggttactcaattgcctgaagttga 60
Query: 1566 tcagaccagtacgtcccgcaaacagatgcttgcccgactagatgtctgcatgggtggccg 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagaccagtacgtcccgcaaacagatgcttgcccgactagatgtctgcatgggtggccg 120
Query: 1626 ggttgctgaagagttgatttttggagaaagtgaagtaacttcaggtgcatcctcagatct 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttgctgaagagttgatttttggagaaagtgaagtaacttcaggtgcatcctcagatct 180
Query: 1686 ttctcatgcaactaaactggctagggcaatggttactcaatatggtatgagcagtgaagt 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctcatgcaactaaactggctagggcaatggttactcaatatggtatgagcagtgaagt 240
Query: 1746 tggacttgccactcacaattacaatgacgatgggagaagcatgagctcagaaactaggct 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggacttgccactcacaattacaatgacgatgggagaagcatgagctcagaaactaggct 300
Query: 1806 gcttattgagaaagaggtgaggaacttgcttgagagggcttataccaatgcaaaaactat 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcttattgagaaagaggtgaggaacttgcttgagagggcttataccaatgcaaaaactat 360
Query: 1866 tctaaccacccatgataaggagcttcaggcacttgcaaatgctcttctagagcatgagac 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctaaccacccatgataaggagcttcaggcacttgcaaatgctcttctagagcatgagac 420
Query: 1926 acttacaggaagtcagataaacgctttacttgctaaagttaactcccagcagcagcaaca 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acttacaggaagtcagataaacgctttacttgctaaagttaactcccagcagcagcaaca 480
Query: 1986 gccacaagtagttgaaactcagggcagttcacggtccaatc 2026
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccacaagtagttgaaactcagggcagttcacggtccaatc 521
Score = 60.0 bits (30), Expect = 6e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 2079 caaggctcaaggtgttgccccagttggatcttag 2112
||||||||||||||||||||||||||||| ||||
Sbjct: 574 caaggctcaaggtgttgccccagttggattttag 607
>gnl|LJGI|TC76368 homologue to UniRef100_A7P4L7 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 483
Score = 946 bits (477), Expect = 0.0
Identities = 480/481 (99%)
Strand = Plus / Plus
Query: 1056 tggattcaagcaaaatgatggcataattgtgattgcagctactaattttccagagtcatt 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tggattcaagcaaaatgatggcataattgtgattgcagctactaattttccagagtcatt 62
Query: 1116 agataaggctttggtaagacctgggcgatttgatcgccatgtcgttgttcccaatccaga 1175
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agataaggctttagtaagacctgggcgatttgatcgccatgtcgttgttcccaatccaga 122
Query: 1176 tgtagaaggaaggcgtcagattctagaatctcacatgtcaaaggttctgaaggctgatga 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgtagaaggaaggcgtcagattctagaatctcacatgtcaaaggttctgaaggctgatga 182
Query: 1236 tgttgatctaatgatcattgctcgaggaacacctgggttctctggtgctgaccttgcaaa 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgttgatctaatgatcattgctcgaggaacacctgggttctctggtgctgaccttgcaaa 242
Query: 1296 catggttaatattgcggctcttaaggctgcaatggatggtgccaaagctgtgagcatgca 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 catggttaatattgcggctcttaaggctgcaatggatggtgccaaagctgtgagcatgca 302
Query: 1356 tgatttagagtttgcgaaggataagattatgatgggaagtgaacgcaagtcggctgttat 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgatttagagtttgcgaaggataagattatgatgggaagtgaacgcaagtcggctgttat 362
Query: 1416 atctgatgagtcgagaaagatgactgctttccacgagggtggccacgccttggtggcaat 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atctgatgagtcgagaaagatgactgctttccacgagggtggccacgccttggtggcaat 422
Query: 1476 tcatactgatggagcgcttcctgttcacaaggcaactatagttccccggggtatggctct 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tcatactgatggagcgcttcctgttcacaaggcaactatagttccccggggtatggctct 482
Query: 1536 t 1536
|
Sbjct: 483 t 483
>gnl|LJGI|GO036061 similar to UniRef100_Q6KC90 Cluster: FtsH-like protease; n=1; Pisum
sativum|Rep: FtsH-like protease - Pisum sativum (Garden
pea), partial (21%)
Length = 815
Score = 307 bits (155), Expect = 2e-82
Identities = 316/368 (85%), Gaps = 10/368 (2%)
Strand = Plus / Plus
Query: 626 tgaatgaggaagtgcagcccagtgtggagacaagtactaaatttagtgacgtaaaaggtg 685
||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||| ||| |
Sbjct: 390 tgaatgaagaagtacagcccaatgtggagtcaagtactaaatttagtgacgtaataggag 449
Query: 686 ---ttgatgaggcaaaggcagaactggaagaaattgttcactacctccgagatcctaagc 742
||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||
Sbjct: 450 gtattgatgaggcaaaggcaaaactgaaagaaattgtgcactacctccgagatcctaagt 509
Query: 743 gctttactcgtcttggtggcaagctccccaaaggggttttgcttgttggcccgcctggca 802
|||||||||||||||| | ||| |||| || || ||||||| ||||||||||||| |
Sbjct: 510 tctttactcgtcttggtaggaagttcccaaagggttttttgctagttggcccgcctgacg 569
Query: 803 cgggtaaaacaatgttggcaagagctattgctggagaggctggggttcctttcttctcat 862
|||||||||| |||||| ||| |||| ||||||| |||| ||||||||||||||||||||
Sbjct: 570 cgggtaaaacgatgttgtcaaaagctgttgctggtgaggttggggttcctttcttctcat 629
Query: 863 gcagtggaagtgaatttgaagagatgtttgttggtgttggtgcacgaagggtgagggatc 922
||||||||||||||||||| || | ||| || ||| ||||||| | |||| ||||
Sbjct: 630 gcagtggaagtgaatttgatgataagtt------tgctggcgcacgaaagatgagtgatc 683
Query: 923 tttttactgctgcaaaaaagcggtcaccttgtataatcttcattgatgagatcgatgcca 982
||||| ||||||| | ||||||| |||||||||| ||||||||||||| |||||||| |
Sbjct: 684 tttttgctgctgc-acaaagcggccaccttgtattatcttcattgatgctatcgatgcga 742
Query: 983 ttggagca 990
||||||||
Sbjct: 743 ttggagca 750
Score = 105 bits (53), Expect = 1e-21
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 237 aaatgatcctgaagctgtgattagagcatttgaaagtcagccatctctacatgctaa 293
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 229 aaatgatcctgaagctgtgatcagagcatttgaaagtcagccatctctacatgctaa 285
Score = 56.0 bits (28), Expect = 9e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 7 tggaggcacttgataacgcaggttacaagacatcaatcagaatttggaatggtcaa 62
||||||| |||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct: 68 tggaggcgtttgatactgcaggttacaaggcttcaatcagaatttggaaaggtcaa 123
Score = 56.0 bits (28), Expect = 9e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 145 ttccaatcaagctatgttggtaatctggcccgtcgagcacgtgatgcagatgaagc 200
||||||||||| ||||||||| ||||||| || |||| |||||| ||||||||||
Sbjct: 164 ttccaatcaagttatgttggtgatctggctcgccgagtacgtgaaacagatgaagc 219
>gnl|LJGI|AV410480 homologue to UniRef100_A7QB63 Cluster: Chromosome chr4 scaffold_73,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_73, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 420
Score = 56.0 bits (28), Expect = 9e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 947 caccttgtataatcttcattgatgagatcgatgccattgg 986
|||||| ||||||||| ||||||||||| |||||||||||
Sbjct: 306 caccttctataatctttattgatgagatagatgccattgg 345