Miyakogusa Predicted Gene

Lj1g3v1785790.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1785790.1 Non Chatacterized Hit- tr|D8TLL4|D8TLL4_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,30.7,3e-16,seg,NULL,CUFF.27821.1
         (786 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62176 similar to UniRef100_A7P4H8 Cluster: Chromosome...  1532   0.0  

>gnl|LJGI|TC62176 similar to UniRef100_A7P4H8 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 1049

 Score = 1532 bits (773), Expect = 0.0
 Identities = 786/790 (99%), Gaps = 4/790 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagaaggagacaggaggagcagggaagaaggaagcagcaggtacactctgcaaccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggaagaaggagacaggaggagcagggaagaaggaagcagcaggtacactctgcaaccc 177

                                                                       
Query: 61  tcacgaatctgcaacgaagacattctcttctgcatcgacatcgatcctcaatctctcgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tcacgaatctgcaacgaagacattctcttctgcatcgacatcgatcctcaatctctcgtc 237

                                                                       
Query: 121 gagatgaaaaccgccaccggacacaacggcagacccctcacccgcttggactccatcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gagatgaaaaccgccaccggacacaacggcagacccctcacccgcttggactccatcaag 297

                                                                       
Query: 181 caatccatccttctcttcgtccattccaagctcaccatcaaccccgatcaccgcttcgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 caatccatccttctcttcgtccattccaagctcaccatcaaccccgatcaccgcttcgct 357

                                                                       
Query: 241 ttcgccactctctccaacaccgtctcatggctgaagaaagattttagcagtgatgttgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttcgccactctctccaacaccgtctcatggctgaagaaagattttagcagtgatgttgaa 417

                                                                       
Query: 301 tcaacaatggcagcaatgaggggtctttcagctaccaatatcagtacccaaccagacctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcaacaatggcagcaatgaggggtctttcagctaccaatatcagtacccaaccagacctc 477

                                                                       
Query: 361 accaatttgttcagacttgctgctcatgaagctaagaaatcgcgtgcccaaggtcgcatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 accaatttgttcagacttgctgctcatgaagctaagaaatcgcgtgcccaaggtcgcatt 537

                                                                       
Query: 421 ttaagagtg----attctattctattgcagatcaaatgtgcgcccacagcatcagtggcc 476
           |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttaagagtggtaaattctattctattgcagatcaaatgtgcgcccacagcatcagtggcc 597

                                                                       
Query: 477 tgtgaaccagaagctctacactctggatgtcatgtaccttcatgacaagcctggacctga 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tgtgaaccagaagctctacactctggatgtcatgtaccttcatgacaagcctggacctga 657

                                                                       
Query: 537 gaattgccctcaggaggtctatgatacactggtggaggctcttgaacatgttagtgagta 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaattgccctcaggaggtctatgatacactggtggaggctcttgaacatgttagtgagta 717

                                                                       
Query: 597 tgagggctatatcttggagagtggacaggggttagcgcgtgttgttttccgtcacgtgtt 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tgagggctatatcttggagagtggacaggggttagcgcgtgttgttttccgtcacgtgtt 777

                                                                       
Query: 657 aatactgctgtcacatcctcagcagcgctgcattcaagagaacattgacatcccgaagtc 716
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aatactgctgtcacatcctcagcagcgctgcattcaagagaacattgacatcccgaagtc 837

                                                                       
Query: 717 acttgcaaagaaggctcctcagggggagccaatggctactgaagagaatgctcctgtttc 776
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 acttgcaaagaaggctcctcagggggagccaatggctactgaagagaatgctcctgtttc 897

                     
Query: 777 cacccaatga 786
           ||||||||||
Sbjct: 898 cacccaatga 907