Miyakogusa Predicted Gene
- Lj1g3v1781090.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1781090.2 Non Chatacterized Hit- tr|I1JTT9|I1JTT9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.56,0,seg,NULL;
DUF221,Domain of unknown function DUF221; RSN1_TM,NULL; PROBABLE
MEMBRANE PROTEIN DUF221-R,CUFF.27792.2
(1917 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79099 similar to UniRef100_A7NUD9 Cluster: Chromosome... 325 6e-88
gnl|LJGI|TC62953 weakly similar to UniRef100_Q681Q0 Cluster: MRN... 230 3e-59
gnl|LJGI|TC68865 weakly similar to UniRef100_A7NUD9 Cluster: Chr... 119 7e-26
gnl|LJGI|TC57888 similar to UniRef100_Q75LY2 Cluster: Expressed ... 68 2e-10
>gnl|LJGI|TC79099 similar to UniRef100_A7NUD9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 1553
Score = 325 bits (164), Expect = 6e-88
Identities = 293/336 (87%)
Strand = Plus / Plus
Query: 574 ggctacactgacattcatatagatgcaagaaaaaaggaatgcgcagctgcttttgtgttc 633
|||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 971 ggctacactgacatgcatctagatacaagaaaaaaggaatgcgcagctgcttttgtgttc 1030
Query: 634 tttaaaagtcggtatgctgctcttatggctgcacaaaatcttcaaacatcaaatcctatg 693
|||||||||||||| || |||| |||||||||||| || ||||||||||||||||||
Sbjct: 1031 tttaaaagtcggtacgcagctcatatggctgcacattcactgcaaacatcaaatcctatg 1090
Query: 694 ttatgggtcacagaccaagctcctgaaccacatgatgtttactggtctaaactgtgcata 753
||||||| |||||| |||||||||||||||||||||||||||||| || | |||||
Sbjct: 1091 ttatgggcaacagacatagctcctgaaccacatgatgtttactggtccaatattagcata 1150
Query: 754 ccatataggcaactttggatccgtaagatagccacacttgtggcttctatgaccttcgtg 813
||||| |||||||||||||||||||| |||| ||||| |||||||| || ||||| ||
Sbjct: 1151 ccatacaggcaactttggatccgtaatgtagctacactcgtggcttcaattgccttcatg 1210
Query: 814 cttgtatttctcatccctgtcacatttgcacaatgcttgactcaactagacaagcttgag 873
|| || || || |||||||| ||||||| |||| ||||||||| ||||||| ||||| ||
Sbjct: 1211 ctcgtgttccttatccctgttacatttgtacaaggcttgactcgactagacgagcttcag 1270
Query: 874 aaaatgttcccttttctgactgggatacttaaaaag 909
||||||||||||||||| | ||||| |||||||||
Sbjct: 1271 aaaatgttcccttttctaatagggattcttaaaaag 1306
Score = 167 bits (84), Expect = 3e-40
Identities = 234/284 (82%)
Strand = Plus / Plus
Query: 154 tggctttgggctcattgtctcgcattatacatcataacattgacaacttgttctcttctt 213
||||||||||||||||||||||||||||||||||||||| | | ||||| ||||||||
Sbjct: 554 tggctttgggctcattgtctcgcattatacatcataacacttgcggcttgtactcttctt 613
Query: 214 tacatagaatttaggagcattactaatttgcggctagcacatatcactggatctccactg 273
||| | |||| || |||||||| |||||| |||| |||||| | |||||| || |
Sbjct: 614 tactttgaatataaaagcattacaaatttgaggctgctacatattattggatcacctcca 673
Query: 274 aatccaagtcattttgcaattcttgtccgaggaataccctggtcttcaaaagtatcatac 333
||||||||||||||| ||||| || ||| ||| |||||||||||| ||| ||||||
Sbjct: 674 aatccaagtcattttagtattctcgtgcgatcaattccctggtcttcagaagaatcatat 733
Query: 334 agtgacacagtaaaaaagtttttctcttactattatgcatcaacatatttgtcacaccaa 393
|||| || || ||||| || ||||| || ||| ||||||||||||||||||||||||||
Sbjct: 734 tgtgagactgtgaaaaaattcttctcatattatcatgcatcaacatatttgtcacaccaa 793
Query: 394 atagtgtatgactctggtgcagttcaaaaactgaaggatgatgc 437
|| | ||| | |||||| |||| || |||||||||||||||||
Sbjct: 794 atgatttataagtctggtacagtacagaaactgaaggatgatgc 837
>gnl|LJGI|TC62953 weakly similar to UniRef100_Q681Q0 Cluster: MRNA, complete cds,
clone: RAFL21-99-B01; n=1; Arabidopsis thaliana|Rep:
MRNA, complete cds, clone: RAFL21-99-B01 - Arabidopsis
thaliana (Mouse-ear cress), partial (6%)
Length = 732
Score = 230 bits (116), Expect = 3e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 32 cagtcattggaacttttctagtgcttccagtgaattactatggtcagagtagaacacgca 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cagtcattggaacttttctagtgcttccagtgaattactatggtcagagtagaacacgca 676
Query: 92 agaatttacatcttgagtcactggacgcttttaccattgagaatgtaaagaaagga 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agaatttacatcttgagtcactggacgcttttaccattgagaatgtaaagaaagga 732
>gnl|LJGI|TC68865 weakly similar to UniRef100_A7NUD9 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 682
Score = 119 bits (60), Expect = 7e-26
Identities = 183/224 (81%)
Strand = Plus / Plus
Query: 1559 ttattgcacttggggtgtttggactgaaagactcaacaattgcatctggatttactattc 1618
||||||| || || ||||||||||| ||| |||| || ||||||||||||| || ||||
Sbjct: 48 ttattgcgctaggagtgtttggactaaaacgctcatcagttgcatctggattcaccattc 107
Query: 1619 ctctcctgattggtaccattctatttcaccaatattgtaggcagagatttcttccggtat 1678
| || |||||||| ||| |||| |||||||| ||||||||||| ||||||| || ||||
Sbjct: 108 ccctgctgattggaacccttctttttcaccagtattgtaggcaacgatttctccctgtat 167
Query: 1679 ttaagaacaatgcagcacaggttcttattgatttggatcagagggatgagcattgcggga 1738
||| || ||| |||||||| | |||||||| ||||| ||| |||||||| || || |
Sbjct: 168 ttaggagtaattcagcacagatccttattgacatggataggagagatgagcagtgtggaa 227
Query: 1739 ggctagaagagatttatgaacaattgcattcagcttactgccag 1782
| |||||||||||||||||||||| |||||| ||| |||||
Sbjct: 228 aaatggaagagatttatgaacaattgcgttcagcctacagccag 271
>gnl|LJGI|TC57888 similar to UniRef100_Q75LY2 Cluster: Expressed protein; n=2; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (6%)
Length = 805
Score = 67.9 bits (34), Expect = 2e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 atgctgtggcttttagtaggttgcttgtgttcag 34
||||||||||||||||||||||||||||||||||
Sbjct: 657 atgctgtggcttttagtaggttgcttgtgttcag 690