Miyakogusa Predicted Gene

Lj1g3v1780050.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1780050.1 Non Chatacterized Hit- tr|J3NF66|J3NF66_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,46.81,0.0000000000003,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.27784.1
         (1236 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78756 similar to UniRef100_A7PC27 Cluster: Chromosome...   698   0.0  
gnl|LJGI|BP035449 similar to UniRef100_A7PJT3 Cluster: Chromosom...   620   e-177

>gnl|LJGI|TC78756 similar to UniRef100_A7PC27 Cluster: Chromosome chr2 scaffold_11,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_11, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (35%)
          Length = 733

 Score =  698 bits (352), Expect = 0.0
 Identities = 352/352 (100%)
 Strand = Plus / Plus

                                                                        
Query: 885  gctgtggctctcccttggatcaaaccatgcaacaagagctctcaacctcgtccatggagc 944
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gctgtggctctcccttggatcaaaccatgcaacaagagctctcaacctcgtccatggagc 60

                                                                        
Query: 945  tttcccaatgattcttggtcatggtggtttggagctctgctcacgggcctatattgttga 1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tttcccaatgattcttggtcatggtggtttggagctctgctcacgggcctatattgttga 120

                                                                        
Query: 1005 agcaaaatgctacctttgcgatacaaacttcaacatctttgaagatcacaacattgtcat 1064
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agcaaaatgctacctttgcgatacaaacttcaacatctttgaagatcacaacattgtcat 180

                                                                        
Query: 1065 agattcactgagacaagcatcagaagaactccagcttctggagtttcatgaattggcagc 1124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  agattcactgagacaagcatcagaagaactccagcttctggagtttcatgaattggcagc 240

                                                                        
Query: 1125 tgaagctttctatctgatggccatggtgtatgataaactggggcagtttgaggaaaggga 1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgaagctttctatctgatggccatggtgtatgataaactggggcagtttgaggaaaggga 300

                                                                
Query: 1185 agaagctgcagcttcatttcagaaacatacactggctctcaccaatcctcaa 1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  agaagctgcagcttcatttcagaaacatacactggctctcaccaatcctcaa 352


>gnl|LJGI|BP035449 similar to UniRef100_A7PJT3 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (20%)
          Length = 549

 Score =  620 bits (313), Expect = e-177
 Identities = 379/401 (94%)
 Strand = Plus / Minus

                                                                        
Query: 836  catttaacctggatcttctaaaagcctcagctactcttactctagctgagctgtggctct 895
            |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 549  catttaacttggatcttctaaaagcctcagctactcttactctagctgagttgtggctct 490

                                                                        
Query: 896  cccttggatcaaaccatgcaacaagagctctcaacctcgtccatggagctttcccaatga 955
            | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 489  ctcttggatcaaaccatgcaacaagggctctcaacctcgtccatggagctttcccaatga 430

                                                                        
Query: 956  ttcttggtcatggtggtttggagctctgctcacgggcctatattgttgaagcaaaatgct 1015
            |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||
Sbjct: 429  ttcttggtcatggtggtttggagcttcgctcacgggcctacattgttgaagcaaaatgct 370

                                                                        
Query: 1016 acctttgcgatacaaacttcaacatctttgaagatcacaacattgtcatagattcactga 1075
            |||||||| |||||||||||||||||||||||||| |||||||||| |||||| || | |
Sbjct: 369  acctttgcaatacaaacttcaacatctttgaagattacaacattgttatagatccattaa 310

                                                                        
Query: 1076 gacaagcatcagaagaactccagcttctggagtttcatgaattggcagctgaagctttct 1135
            |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||
Sbjct: 309  gacaagcatcagaagaactccaacttttggagtttcatgaattggcggctgaagctttct 250

                                                                        
Query: 1136 atctgatggccatggtgtatgataaactggggcagtttgaggaaagggaagaagctgcag 1195
            |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 249  atctgatggccatggtatatgataaactggggcagtatgaggaaagggaagaagctgcag 190

                                                     
Query: 1196 cttcatttcagaaacatacactggctctcaccaatcctcaa 1236
            |||||||||||||||| ||| ||||||||  ||||||||||
Sbjct: 189  cttcatttcagaaacacacattggctctcgacaatcctcaa 149