Miyakogusa Predicted Gene
- Lj1g3v1755620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1755620.1 Non Chatacterized Hit- tr|K4CBQ3|K4CBQ3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.35,2e-18,domain in transcription factors and synapse-,BSD;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; B,CUFF.27758.1
(1401 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68849 similar to UniRef100_A7NUB4 Cluster: Chromosome... 1429 0.0
gnl|LJGI|BW596960 similar to UniRef100_A7NUB4 Cluster: Chromosom... 422 e-117
>gnl|LJGI|TC68849 similar to UniRef100_A7NUB4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 777
Score = 1429 bits (721), Expect = 0.0
Identities = 721/721 (100%)
Strand = Plus / Plus
Query: 678 ggaagaagacaccgacgatttcgacatgtccgaagcccaacaagagcatgctgcggttat 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaagaagacaccgacgatttcgacatgtccgaagcccaacaagagcatgctgcggttat 60
Query: 738 tgaaaggcttgctccgagattagctgcgctcaggattgaactgtgtccttgccatatgag 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaaaggcttgctccgagattagctgcgctcaggattgaactgtgtccttgccatatgag 120
Query: 798 tgagggttacttctggaaagtctatttcgtgctcttgcattcaaggcttaataaacaaga 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagggttacttctggaaagtctatttcgtgctcttgcattcaaggcttaataaacaaga 180
Query: 858 tactgacattttgtctacaccccaggtcagggaagccagagcaatgtggatgaaggaatt 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tactgacattttgtctacaccccaggtcagggaagccagagcaatgtggatgaaggaatt 240
Query: 918 gcataaacaaatgaagccagaatttgaaatttttggaagaaattctttctacttgaagga 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcataaacaaatgaagccagaatttgaaatttttggaagaaattctttctacttgaagga 300
Query: 978 cagtgttcaacctgatgatttttctcctagattagtagatgacacctgttctgatgacac 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtgttcaacctgatgatttttctcctagattagtagatgacacctgttctgatgacac 360
Query: 1038 gcctcatcggacttatggatctgaaacaacaacttcttcgtccatgatggcagataacga 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcctcatcggacttatggatctgaaacaacaacttcttcgtccatgatggcagataacga 420
Query: 1098 gattgagaaatatccggttgaaagttctggaacacatttcatcgataaatcagttactga 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gattgagaaatatccggttgaaagttctggaacacatttcatcgataaatcagttactga 480
Query: 1158 ggaaaatattgttaaaactgaaaacaaggatctaagaagtggtgggccatctcatatgat 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaaaatattgttaaaactgaaaacaaggatctaagaagtggtgggccatctcatatgat 540
Query: 1218 tattcaggactatggtggtgatgatgacaacgaatggccagaggaagattctgatttagg 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tattcaggactatggtggtgatgatgacaacgaatggccagaggaagattctgatttagg 600
Query: 1278 aggatatgttggaaccagtctccccttgttgaatgaagaagacatatctttcagtgatct 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggatatgttggaaccagtctccccttgttgaatgaagaagacatatctttcagtgatct 660
Query: 1338 cgaggatgatgattatgatattaaacatgttagttccaatacaggttcaaagctggtatg 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgaggatgatgattatgatattaaacatgttagttccaatacaggttcaaagctggtatg 720
Query: 1398 a 1398
|
Sbjct: 721 a 721
>gnl|LJGI|BW596960 similar to UniRef100_A7NUB4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 541
Score = 422 bits (213), Expect = e-117
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 195 cgatgaaacgcatgggcgtggtggtgttaaagaggacctcgacgagatcaagcaaaccct 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cgatgaaacgcatgggcgtggtggtgttaaagaggacctcgacgagatcaagcaaaccct 342
Query: 255 aacccgtcaattctggggaatggcctccttcctcgccccgccgccaccaccaccttccca 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aacccgtcaattctggggaatggcctccttcctcgccccgccgccaccaccaccttccca 402
Query: 315 atccgatcgcgccgcacctttcttttccgatcactctctttccggcggtgcaaacgaaga 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atccgatcgcgccgcacctttcttttccgatcactctctttccggcggtgcaaacgaaga 462
Query: 375 acaacaattggatcatggaggtaatcgtaatcc 407
|||||||||||||||||||||||||||||||||
Sbjct: 463 acaacaattggatcatggaggtaatcgtaatcc 495
Score = 325 bits (164), Expect = 4e-88
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 1 atgtcttcgtggcttgcccgttccctgaaaaactctctccgcctcgacgacgacggagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atgtcttcgtggcttgcccgttccctgaaaaactctctccgcctcgacgacgacggagac 151
Query: 61 gaccaaatcgccgccgcaccggattcaccaaccgggacccacccgcaacaccaacaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gaccaaatcgccgccgcaccggattcaccaaccgggacccacccgcaacaccaacaacag 211
Query: 121 attcaaccaccgcaagagaatgataataataatgcagttagatc 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 attcaaccaccgcaagagaatgataataataatgcagttagatc 255