Miyakogusa Predicted Gene

Lj1g3v1743570.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1743570.1 tr|B9IBL5|B9IBL5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_571985 PE=4
SV=1,36.14,2e-18,seg,NULL,CUFF.27748.1
         (498 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59223 similar to UniRef100_Q75KB0 Cluster: Expressed ...   571   e-162

>gnl|LJGI|TC59223 similar to UniRef100_Q75KB0 Cluster: Expressed protein; n=1; Oryza
           sativa Japonica Group|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice), partial (12%)
          Length = 1193

 Score =  571 bits (288), Expect = e-162
 Identities = 288/288 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgaggagcaaggggcagagccagagcatgttcatgaagatcatggcttcaccattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  atgatgaggagcaaggggcagagccagagcatgttcatgaagatcatggcttcaccattc 144

                                                                       
Query: 61  agagcacttggaagagcaagggatgcttatgttcgcagcatcacgacttgtggtcagagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agagcacttggaagagcaagggatgcttatgttcgcagcatcacgacttgtggtcagagt 204

                                                                       
Query: 121 gtgagttatggcaaccccatggaccctgcagggaggttctcttctctgtcaaggagccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gtgagttatggcaaccccatggaccctgcagggaggttctcttctctgtcaaggagccag 264

                                                                       
Query: 181 agcgtggccacttcgcggtcgggcgatggcgatgattatgcagagctcttgagggctgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcgtggccacttcgcggtcgggcgatggcgatgattatgcagagctcttgagggctgca 324

                                                           
Query: 241 tctgctagaaccatggttggtagaattgacatggatttgattctgaaa 288
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgctagaaccatggttggtagaattgacatggatttgattctgaaa 372



 Score =  359 bits (181), Expect = 1e-98
 Identities = 181/181 (100%)
 Strand = Plus / Plus

                                                                       
Query: 318 tcgttatcacactgagggaccaaaagggtccaagttgccaaagtctagcagtgttgggat 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcgttatcacactgagggaccaaaagggtccaagttgccaaagtctagcagtgttgggat 461

                                                                       
Query: 378 gggtaggattgatgaggagacaccttatgatacctcagaagggggtgttgcttttgtggc 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gggtaggattgatgaggagacaccttatgatacctcagaagggggtgttgcttttgtggc 521

                                                                       
Query: 438 acctgattcatacccgagaagtaagagctatgctgtgggaaagagaaacgttgctttctg 497
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 acctgattcatacccgagaagtaagagctatgctgtgggaaagagaaacgttgctttctg 581

            
Query: 498 a 498
           |
Sbjct: 582 a 582