Miyakogusa Predicted Gene

Lj1g3v1732390.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1732390.1 tr|G7JW84|G7JW84_MEDTR Xanthine/uracil/vitamin C
permease OS=Medicago truncatula GN=MTR_5g022110
PE=,76.8,0,SODIUM-DEPENDENT VITAMIN C TRANSPORTER,NULL;
XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER,Xant,CUFF.27733.1
         (540 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS356039 similar to UniRef100_A7PD55 Cluster: Chromosom...    52   4e-06
gnl|LJGI|TC76346 similar to UniRef100_Q27GI3 Cluster: Nucleobase...    52   4e-06

>gnl|LJGI|FS356039 similar to UniRef100_A7PD55 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 699

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 67  gtgggaagccgaagagtcatccaaatatcagctggctttatgattattttctctgtattt 126
           ||||| |||||||| ||  | |||||||||||||| || |||||| |||||||  |  ||
Sbjct: 639 gtgggtagccgaagggttgttcaaatatcagctggattcatgatttttttctcaattctt 580

                         
Query: 127 ggaaaatttggagc 140
           ||||||||||||||
Sbjct: 579 ggaaaatttggagc 566


>gnl|LJGI|TC76346 similar to UniRef100_Q27GI3 Cluster: Nucleobase-ascorbate
           transporter 6; n=1; Arabidopsis thaliana|Rep:
           Nucleobase-ascorbate transporter 6 - Arabidopsis
           thaliana (Mouse-ear cress), partial (28%)
          Length = 718

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 221 gttttctccagttctgcaacctcaacagtttcagaaccaaattcgt 266
           ||||||| || |||||||||||||| ||||||||||| || |||||
Sbjct: 94  gttttcttcaattctgcaacctcaatagtttcagaacaaagttcgt 139