Miyakogusa Predicted Gene

Lj1g3v1732340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1732340.1 Non Chatacterized Hit- tr|B6UHS8|B6UHS8_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2 SV=1,52.33,2e-16,
,CUFF.27730.1
         (273 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CN825416 similar to UniRef100_Q9FZI9 Cluster: F17L21.26...   541   e-154

>gnl|LJGI|CN825416 similar to UniRef100_Q9FZI9 Cluster: F17L21.26; n=1; Arabidopsis
           thaliana|Rep: F17L21.26 - Arabidopsis thaliana
           (Mouse-ear cress), partial (9%)
          Length = 585

 Score =  541 bits (273), Expect = e-154
 Identities = 273/273 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtgggtcagccacaatgttcatggctcaagtccatggtcacctgcacaaggatcagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atggtgggtcagccacaatgttcatggctcaagtccatggtcacctgcacaaggatcagt 296

                                                                       
Query: 61  ggagaggtgacactgaatcttccttttgattcaagtgtgccaatttcatcaaatggattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggagaggtgacactgaatcttccttttgattcaagtgtgccaatttcatcaaatggattt 236

                                                                       
Query: 121 tcttgctgggtgaggatagattggaaaagggaccataagaacacatcatcagtcaatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tcttgctgggtgaggatagattggaaaagggaccataagaacacatcatcagtcaatgct 176

                                                                       
Query: 181 ttctgtgatgttatgagattatcctgtgaatccaagcactacctcttcacatggaggttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ttctgtgatgttatgagattatcctgtgaatccaagcactacctcttcacatggaggttc 116

                                            
Query: 241 cacactgctggtagtagtacgatagaaatatag 273
           |||||||||||||||||||||||||||||||||
Sbjct: 115 cacactgctggtagtagtacgatagaaatatag 83