Miyakogusa Predicted Gene

Lj1g3v1732300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1732300.1 tr|B9IBR2|B9IBR2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_823869 PE=4
SV=1,59.46,0.0002,seg,NULL; coiled-coil,NULL,CUFF.27727.1
         (201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU089408 similar to UniRef100_A7NU94 Cluster: Chromosom...   398   e-111
gnl|LJGI|TC65729 similar to UniRef100_A7NU94 Cluster: Chromosome...   117   3e-26
gnl|LJGI|TC73916 similar to UniRef100_A7NU94 Cluster: Chromosome...   101   2e-21

>gnl|LJGI|AU089408 similar to UniRef100_A7NU94 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 522

 Score =  398 bits (201), Expect = e-111
 Identities = 201/201 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggctgtgctttggttgcttcgatgggggcaacaagcgtatgaccaaggaggaagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21  atggggctgtgctttggttgcttcgatgggggcaacaagcgtatgaccaaggaggaagag 80

                                                                       
Query: 61  agattggcctctgaagaagcacgcgccagagccgctgaagccgcccagaaaaagcaagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  agattggcctctgaagaagcacgcgccagagccgctgaagccgcccagaaaaagcaagaa 140

                                                                       
Query: 121 caacaaggaggggcaaagcaaccagatatgggaaagcaacctgaaaactccaacaatggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 caacaaggaggggcaaagcaaccagatatgggaaagcaacctgaaaactccaacaatggc 200

                                
Query: 181 gaacaatttgtaaaagtttag 201
           |||||||||||||||||||||
Sbjct: 201 gaacaatttgtaaaagtttag 221


>gnl|LJGI|TC65729 similar to UniRef100_A7NU94 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 684

 Score =  117 bits (59), Expect = 3e-26
 Identities = 104/119 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggctgtgctttggttgcttcgatgggggcaacaagcgtatgaccaaggaggaagag 60
           ||||| || ||||| ||||||||||  || ||  ||||||| ||||||||||| ||||||
Sbjct: 97  atgggtctctgcttcggttgcttcggcggaggagacaagcgcatgaccaaggaagaagag 156

                                                                      
Query: 61  agattggcctctgaagaagcacgcgccagagccgctgaagccgcccagaaaaagcaaga 119
           |||||||||||||||||||| || |||||||| ||||||||||| ||||||| ||||||
Sbjct: 157 agattggcctctgaagaagcgcgtgccagagctgctgaagccgcacagaaaaggcaaga 215


>gnl|LJGI|TC73916 similar to UniRef100_A7NU94 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 514

 Score =  101 bits (51), Expect = 2e-21
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggctgtgctttggttgcttcgatgggggcaacaagcgtatgaccaaggaggaagag 60
           ||||| || ||||| ||||||||||  || ||  ||||||| ||| ||||||| ||||||
Sbjct: 9   atgggtctctgcttcggttgcttcggcggaggagacaagcgcatggccaaggaagaagag 68

                                                                      
Query: 61  agattggcctctgaagaagcacgcgccagagccgctgaagccgcccagaaaaagcaaga 119
           |||||||||||||||||||| || |||||||| ||||||||| | ||||||| ||||||
Sbjct: 69  agattggcctctgaagaagcgcgtgccagagctgctgaagcctcacagaaaaggcaaga 127