Miyakogusa Predicted Gene
- Lj1g3v1732290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1732290.1 Non Chatacterized Hit- tr|I1JTR1|I1JTR1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.89,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; TETRATRICOPEPTIDE REPEAT PROTEIN, TPR,NULL;
coiled-coil,NULL; TP,CUFF.27726.1
(2157 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP054586 similar to UniRef100_A7NU93 Cluster: Chromosom... 402 e-111
gnl|LJGI|FS354559 similar to UniRef100_A7NU93 Cluster: Chromosom... 321 1e-86
gnl|LJGI|TC78576 similar to UniRef100_A7NU93 Cluster: Chromosome... 208 1e-52
gnl|LJGI|TC73740 homologue to UniRef100_Q5UNT5 Cluster: Uncharac... 74 4e-12
>gnl|LJGI|BP054586 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 340
Score = 402 bits (203), Expect = e-111
Identities = 206/207 (99%)
Strand = Plus / Minus
Query: 1951 ttgttgctgaaactggggatgcaatcacttccaattgcaagaagctttttgatgaatgct 2010
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttgttgctgaaactggggatgccatcacttccaattgcaagaagctttttgatgaatgct 281
Query: 2011 ttgcggatagaaccggaaaaccatgatgtgtggttcaaccttggattggtttcaaaaagc 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttgcggatagaaccggaaaaccatgatgtgtggttcaaccttggattggtttcaaaaagc 221
Query: 2071 gaaggttcattacagcaagcagcagattactttcaagctgcatatgaactaaagctttcc 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaaggttcattacagcaagcagcagattactttcaagctgcatatgaactaaagctttcc 161
Query: 2131 gctccagtgcaaaaatttgagtaattg 2157
|||||||||||||||||||||||||||
Sbjct: 160 gctccagtgcaaaaatttgagtaattg 134
>gnl|LJGI|FS354559 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 641
Score = 321 bits (162), Expect = 1e-86
Identities = 381/454 (83%)
Strand = Plus / Minus
Query: 1201 aaatttctaggtgtttgctatggagctgcagccagaatttctgtactggattgtgaaaga 1260
|||||||| ||| | ||| ||||||| || || ||||| ||||||||||||| |||||||
Sbjct: 579 aaatttcttggtatctgccatggagcagcggctagaatatctgtactggattctgaaaga 520
Query: 1261 agtgtatttcaaagtgagtctttgaactttctaaactgcgctgctgtaagtggaaatggt 1320
| ||||||||| |||||||| |||||||||||| |||| | ||| |||||||
Sbjct: 519 gtttcatttcaaagagagtctttaaactttctaaacaaagctgttttaaacggaaatgac 460
Query: 1321 gacccggaagttatattcagccttggactggaaaatgcaattcaaaggaatctggatgca 1380
||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 459 gaccctgaagcaatattcagccttggactggaaaatgcagttcaaaggaatctaaatgca 400
Query: 1381 gcttatgacaatataatgatgtactcaaacatgactgttggaggttcaggaagaggatgg 1440
||| ||||||| || |||||||||||| |||||| |||||| | || ||||||| |||
Sbjct: 399 gctcatgacaacatgatgatgtactcagacatgatggttggaagctctagaagaggttgg 340
Query: 1441 cagctattagcactcatcgtatctgcacagaagcgacttatggatgctgaaactatagtt 1500
|||| |||||||| || |||||||||||| || | ||| |||||| |||||| |||||
Sbjct: 339 aagctgttagcacttatagtatctgcacagcagaggtttaaggatgcagaaactttagtt 280
Query: 1501 gattttgcattagatgaggctgggaggagggatcagctagaacttctacgattgaaagca 1560
|||||||| ||||||||| ||||||| | |||||| ||||||| ||| ||||||||||
Sbjct: 279 gattttgctttagatgagtctgggagaatagatcagttagaactactaagattgaaagct 220
Query: 1561 gtacttcaaattgctcagcaacaacccaatcaagcattagagtcctacagaatcctgcta 1620
|| ||||||||| ||||||| |||||||| |||||| ||||| ||||||||||| |||||
Sbjct: 219 gtgcttcaaatttctcagcagcaacccaaacaagcaatagagacctacagaatcttgcta 160
Query: 1621 gcactaattcaagccaaaaaggagctttggcttc 1654
||| |||| ||||| ||||||||| ||||||||
Sbjct: 159 gcagtaatacaagcaaaaaaggaggcttggcttc 126
>gnl|LJGI|TC78576 similar to UniRef100_A7NU93 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 741
Score = 208 bits (105), Expect = 1e-52
Identities = 352/432 (81%), Gaps = 13/432 (3%)
Strand = Plus / Plus
Query: 1 atgttgtgtgcttgctccggggagcagttcaagttagaagagccgccgccgcggtcgccg 60
|||||||||||||||||||||||||| ||||| || |||||| |||||| | || |||
Sbjct: 284 atgttgtgtgcttgctccggggagcaattcaaatttgaagaggcgccgcag---tcaccg 340
Query: 61 gagtcccttgcaaccagggatttctccgccagtgggctatcttcca------ggactgca 114
|| ||||| ||||| ||||||||||| || ||||| |||||||| | |||| |
Sbjct: 341 gaatccctggcaacaagggatttctctgctagtggactatcttcaaattcaaggacaggg 400
Query: 115 gattgggattccaaattcagtgaaa-cccaagttgaagaagctgaaactactctcaaaga 173
||||| || |||||||||||||| ||||||| |||| |||||| ||||||| |||||
Sbjct: 401 gattgtgaatccaaattcagtgagtgcccaagtaaaagatgctgaatctactctaaaaga 460
Query: 174 agccctttccttgaactatgaggaagctagggctttgctggggaggctggaataccaaag 233
||| || || || ||||||||||||||| | ||||||||||||||||| ||||| |||||
Sbjct: 461 agctctctcattaaactatgaggaagctcgagctttgctggggaggcttgaatatcaaag 520
Query: 234 gggaaactatgatgcttcccttcaagtatttcaaggtatagacatcaagggtttgacccc 293
|| |||| ||||||| |||||||||| |||||||||||||||||||||| | | | |||
Sbjct: 521 agggaactttgatgctgcccttcaagtgtttcaaggtatagacatcaaggctataagccc 580
Query: 294 gaggatgatcaatgtaattgctgaaagaactaagcaaagaaagccacgatcgaaggcaga 353
|||||||| | | || |||||||||| ||||||||||| || || || ||||| ||
Sbjct: 581 aaggatgattagggctataactgaaagaaccaagcaaagaaaaccgcgttcaaaggccga 640
Query: 354 cgtcgtgattcttccgaatgtgatgtcattgcattctgtaagcctgcttcttgaggcaat 413
||| ||||| ||| |||||||| ||||||| |||||| ||||||||||||||||
Sbjct: 641 taatgtg---cttccaaatttgatgtcaatgcattcagtaagcttgcttcttgaggcaat 697
Query: 414 tttgcttaaagc 425
|| ||||||||
Sbjct: 698 ttatcttaaagc 709
>gnl|LJGI|TC73740 homologue to UniRef100_Q5UNT5 Cluster: Uncharacterized protein
R681; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized protein R681 - Acanthamoeba polyphaga
mimivirus (APMV), partial (8%)
Length = 488
Score = 73.8 bits (37), Expect = 4e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 atgttgtgtgcttgctccggggagcagttcaagttag 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgttgtgtgcttgctccggggagcagttcaagttag 488