Miyakogusa Predicted Gene

Lj1g3v1720240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1720240.1 Non Chatacterized Hit- tr|I1JTQ7|I1JTQ7_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,95.62,0,Calcium
ATPase, transmembrane domain M,NULL; Calcium ATPase, transduction
domain A,NULL; HAD-like,HA,CUFF.27740.1
         (892 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP066255 homologue to UniRef100_Q8L8A0 Cluster: Type II...   182   2e-45

>gnl|LJGI|BP066255 homologue to UniRef100_Q8L8A0 Cluster: Type IIB calcium ATPase
           MCA5; n=1; Medicago truncatula|Rep: Type IIB calcium
           ATPase MCA5 - Medicago truncatula (Barrel medic),
           partial (17%)
          Length = 540

 Score =  182 bits (92), Expect = 2e-45
 Identities = 393/492 (79%), Gaps = 1/492 (0%)
 Strand = Plus / Plus

                                                                       
Query: 387 tctctcaggaaccaaaatccaggatggatcatgcaagatgcttgttactaccgttggaat 446
           |||||| ||||||||  |||| ||||||||| |||||||| |  |||| || ||||||||
Sbjct: 2   tctctctggaaccaaggtccaagatggatca-gcaagatgttgattacaactgttggaat 60

                                                                       
Query: 447 gaggacccaatggggcaaactaatggctactctcagtgaggggggagacgatgaaactcc 506
           |||||| |||||||||||  | ||||||||||||| ||| || || || |||||||| ||
Sbjct: 61  gaggactcaatggggcaagttgatggctactctcactgaaggcggggatgatgaaacccc 120

                                                                       
Query: 507 cttgcaggtaaaactcaatggtgtggctaccattattgggaaaataggcctcttttttgc 566
            || ||||| ||| | ||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 121 attacaggtgaaattgaatggagtggcaaccattattgggaagataggcctattctttgc 180

                                                                       
Query: 567 tgttgtgacattttctgtgttggttcaagggctatttagccgcaagctacaagaaggatc 626
             |||| || ||| | ||  |||| ||||| ||  | ||||  || || ||| |||    
Sbjct: 181 aattgttacttttgcagttctggtgcaaggacttgtgagccataaactccaacaagatag 240

                                                                       
Query: 627 ccaatggacatggtctggtgatgatgctatggaaattgtggaattctttgccattgctgt 686
           |   ||||  ||| |||| ||||| ||  |||| ||  |||| | |||||| ||||| ||
Sbjct: 241 cttttggagctggactggggatgacgcgttggagatgttggagtactttgcgattgcagt 300

                                                                       
Query: 687 tactattgttgttgttgctgttcctgaaggtttacctttagccgtaacattgagccttgc 746
           ||| || |||||||| |||||||| ||||| || || ||||| || ||  ||||||||||
Sbjct: 301 taccatcgttgttgtagctgttccagaagggttgccattagctgtgactctgagccttgc 360

                                                                       
Query: 747 ttttgccatgaaaaagatgatgaatgataaggcactcgtccgtaatttggctgcttgtga 806
            ||||| ||||| |||||||||||||| || || ||||||||  ||||||| ||||||||
Sbjct: 361 atttgctatgaagaagatgatgaatgacaaagccctcgtccgacatttggcagcttgtga 420

                                                                       
Query: 807 gacaatgggatcctccactaccatctgcagtgacaagactggtacactaaccaccaacca 866
           ||| ||||||||  |||| || || ||||||||||||||||| |||||||| ||||| ||
Sbjct: 421 gaccatgggatcagccacaactatatgcagtgacaagactggaacactaacaaccaatca 480

                       
Query: 867 tatgactgttgt 878
            |||||||||||
Sbjct: 481 catgactgttgt 492