Miyakogusa Predicted Gene
- Lj1g3v1720220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1720220.1 Non Chatacterized Hit- tr|I1JTQ4|I1JTQ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8919
PE=,76.1,0,UBA-like,UBA-like; CUE,Ubiquitin system component Cue;
SUBFAMILY NOT NAMED,NULL; ACTIVATING SIGNAL C,CUFF.27720.1
(2562 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC592898 similar to UniRef100_A7NU84 Cluster: Chromosom... 955 0.0
gnl|LJGI|BF177494 similar to UniRef100_Q9SFY4 Cluster: T22C5.20;... 615 e-175
gnl|LJGI|TC67862 similar to UniRef100_A7NU84 Cluster: Chromosome... 188 1e-46
gnl|LJGI|BP057893 homologue to UniRef100_A7NU84 Cluster: Chromos... 157 4e-37
gnl|LJGI|BP039999 homologue to UniRef100_A7JWS5 Cluster: Dihydro... 88 3e-16
gnl|LJGI|TC74230 homologue to UniRef100_A7JWS5 Cluster: Dihydrol... 80 8e-14
>gnl|LJGI|DC592898 similar to UniRef100_A7NU84 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 593
Score = 955 bits (482), Expect = 0.0
Identities = 525/544 (96%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 1 atgtcgaatcgattcagtcaaggaaggcaagacactagtacnnnnnnnnnnnnnnnnnng 60
||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 51 atgtcgaatcgattcagtcaaggaaggcaagacactagtaccaacaacaacaacaacaag 110
Query: 61 ggtttcaacaaatcacacaagaaatttctccccaaaaaccccaacccgaaaccaaccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ggtttcaacaaatcacacaagaaatttctccccaaaaaccccaacccgaaaccaaccctt 170
Query: 121 tcagcttccctcagagaatctggttccggtagcagtagcggtaatccgtcaggtagcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tcagcttccctcagagaatctggttccggtagcagtagcggtaatccgtcaggtagcgac 230
Query: 181 gttggcaatggcaatttcgtcaaatacttgccgcaagacgaggctgtggcagctggtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gttggcaatggcaatttcgtcaaatacttgccgcaagacgaggctgtggcagctggtctt 290
Query: 241 ggcgctgaggatggcggtttggatcccatcgaatctcagagagtcgttgatcttctcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggcgctgaggatggcggtttggatcccatcgaatctcagagagtcgttgatcttctcaat 350
Query: 301 tctgagttgtctcggttgctcaagttgaaacctaaagaattctggaaacaagtggctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tctgagttgtctcggttgctcaagttgaaacctaaagaattctggaaacaagtggctgct 410
Query: 361 gacacctccttgcatgcgtttctggatagcttcttgcaatttaggagcaggtggtatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gacacctccttgcatgcgtttctggatagcttcttgcaatttaggagcaggtggtatgat 470
Query: 421 ttccctcaccgtggggttaaagggattcttgcaggtgttattgttggagagattgatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttccctcaccgtggggttaaagggattcttgcaggtgttattgttggagagattgatttg 530
Query: 481 agtcgccgcgtgttcatggtattgtatcgaatttcttccaataaagatcctggtggtcgg 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 531 agtcgccgcgtgttcatggtattgtatcgaatttcttcc-ataaagatcctggtggtcgg 589
Query: 541 cctg 544
||||
Sbjct: 590 cctg 593
>gnl|LJGI|BF177494 similar to UniRef100_Q9SFY4 Cluster: T22C5.20; n=1; Arabidopsis
thaliana|Rep: T22C5.20 - Arabidopsis thaliana (Mouse-ear
cress), partial (4%)
Length = 314
Score = 615 bits (310), Expect = e-175
Identities = 313/314 (99%)
Strand = Plus / Plus
Query: 1492 gaagatgcggctattatagagtcaaagatcagtcaaattagggacctgttccctgattat 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagatgcggctattatagagtcaaagatcagtcaaattagggacctgttccctgattat 60
Query: 1552 ggtaaagggttcttagctgcctgtctcgaggtttatgaccagaatccagaagaggttatt 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtaaagggttcttagctgcctgtctcgaggtttatgaccagaatccagaagaggttatt 120
Query: 1612 caaagaattttagaggatacccttcatgaagatctgcggtgcttggatacttctctagag 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagaattttagaggatacccttcatgaagatctgcggtgcttggatacttctctagag 180
Query: 1672 acagttccacagtcattagccaagaccaccactgtgagcagaattgataaaggaaaaggt 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagttccacagtcattagccaagaccaccactgtgagcagaattgataaaggaaaaggt 240
Query: 1732 aaattaattgattctacgtcagtgtcctcaaatacagttgttgttagtgggaagcaacag 1791
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 aaattaattgattctacgtcagtgtcctcaaatacagttgttgttagtgggaagccacag 300
Query: 1792 acagaagcgccatt 1805
||||||||||||||
Sbjct: 301 acagaagcgccatt 314
>gnl|LJGI|TC67862 similar to UniRef100_A7NU84 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 678
Score = 188 bits (95), Expect = 1e-46
Identities = 189/219 (86%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 258 tttggatcccatcgaatctcagagagtcgttgatcttctcaattctgagttgtctcggtt 317
|||||||||||| |||||||||||||| |||||||| || ||||| |||||||||| ||
Sbjct: 115 tttggatcccattgaatctcagagagttgttgatctcctgaattcagagttgtctccttt 174
Query: 318 gctcaagttgaaacctaaagaattctggaaacaagtggctgctgacacctccttgcatgc 377
|||||||||||||| || ||||| ||||||| |||||||| |||||| || | | |||
Sbjct: 175 -ctcaagttgaaacccaaggaattatggaaaccagtggctgttgacacttcttggtatga 233
Query: 378 gtttctggatagcttcttgcaatttaggagcaggtggtatgatttccctcaccgtggggt 437
| ||||||||||||| |||||||| |||||||||||||||| ||||| |||| |||||||
Sbjct: 234 ggttctggatagctttttgcaattcaggagcaggtggtatgctttccttcactgtggggt 293
Query: 438 taaagggattcttgcaggtgttattgttggagagattga 476
||||||||| ||| |||||||||||||| ||| ||||
Sbjct: 294 caaagggattgttgagggtgttattgttggcgagcttga 332
>gnl|LJGI|BP057893 homologue to UniRef100_A7NU84 Cluster: Chromosome chr18 scaffold_1
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (1%)
Length = 509
Score = 157 bits (79), Expect = 4e-37
Identities = 84/86 (97%)
Strand = Plus / Minus
Query: 2477 gagggaggggaggtggaagaagcaaccattacaggaaagaccaagccatgaagaagcatt 2536
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 509 gagggaggggagntggaagaagccaccattacaggaaagaccaagccatgaagaagcatt 450
Query: 2537 tctctggattgggtggtttttaagta 2562
||||||||||||||||||||||||||
Sbjct: 449 tctctggattgggtggtttttaagta 424
>gnl|LJGI|BP039999 homologue to UniRef100_A7JWS5 Cluster: Dihydrolipoyllysine-residue
acetyltransferase; n=1; Mannheimia haemolytica
PHL213|Rep: Dihydrolipoyllysine-residue
acetyltransferase - Mannheimia haemolytica PHL213,
partial (8%)
Length = 552
Score = 87.7 bits (44), Expect = 3e-16
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 258 tttggatcccatcgaatctcagagagtcgttgatcttctcaattctgagttgtctcggtt 317
|||||||||||| |||| ||||||||| ||||| || || ||||| |||||||||| ||
Sbjct: 347 tttggatcccattgaatttcagagagttgttgaactcctgaattcagagttgtctc-ctt 289
Query: 318 gctcaagttgaaacctaaagaattctggaaac 349
||||||||||||||| || |||||||||||||
Sbjct: 288 gctcaagttgaaacccaaggaattctggaaac 257
>gnl|LJGI|TC74230 homologue to UniRef100_A7JWS5 Cluster: Dihydrolipoyllysine-residue
acetyltransferase; n=1; Mannheimia haemolytica
PHL213|Rep: Dihydrolipoyllysine-residue
acetyltransferase - Mannheimia haemolytica PHL213,
partial (8%)
Length = 585
Score = 79.8 bits (40), Expect = 8e-14
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 258 tttggatcccatcgaatctcagagagtcgttgatcttctcaattctgagttgtctcggtt 317
||||||||||||||||||||| ||||| ||||| || | ||||| |||||||||| ||
Sbjct: 303 tttggatcccatcgaatctcaaagagttgttgaactcatgaattcagagttgtctc-ctt 361
Query: 318 gctcaagttgaaacctaaagaattctggaaac 349
||||||||||||||| || ||||| |||||||
Sbjct: 362 gctcaagttgaaacccaaggaattttggaaac 393