Miyakogusa Predicted Gene

Lj1g3v1720090.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1720090.1 tr|Q9M613|Q9M613_PINTA 26S proteasome regulatory
subunit 8 OS=Pinus taeda PE=2 SV=1,94.34,1e-22,AAA,ATPase, AAA-type,
core; P-loop containing nucleoside triphosphate hydrolases,NULL; 26S
PROTEASE ,CUFF.27722.1
         (369 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61766 homologue to UniRef100_A7P7P4 Cluster: Chromoso...   236   8e-62
gnl|LJGI|TC61103 similar to UniRef100_A7PU25 Cluster: Chromosome...   149   1e-35
gnl|LJGI|TC72992 similar to UniRef100_A7PU25 Cluster: Chromosome...   147   6e-35
gnl|LJGI|GO023739 similar to UniRef100_A7PU25 Cluster: Chromosom...   143   9e-34
gnl|LJGI|TC82699 similar to UniRef100_A7PU25 Cluster: Chromosome...   143   9e-34
gnl|LJGI|TC58932 similar to UniRef100_A7PU25 Cluster: Chromosome...   113   8e-25
gnl|LJGI|DC593315 homologue to UniRef100_A7P5J9 Cluster: Chromos...   103   7e-22
gnl|LJGI|GO011139 homologue to UniRef100_A7QET1 Cluster: Chromos...    76   2e-13
gnl|LJGI|BP040285                                                      50   1e-05
gnl|LJGI|TC78243                                                       50   1e-05

>gnl|LJGI|TC61766 homologue to UniRef100_A7P7P4 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 1733

 Score =  236 bits (119), Expect = 8e-62
 Identities = 149/159 (93%)
 Strand = Plus / Plus

                                                                       
Query: 135 ggtcattgaggtaccaattaaacatcctgagttgtttgaaagtcctggaatagcacaacc 194
           |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 619 ggtcattgagctaccaattaaacatcctgagctgtttgaaagtcttggaatagcacaacc 678

                                                                       
Query: 195 aaagggtgttttactctatggtccacctggtacaagaaaaacactgttggctagggcagt 254
            ||||||||| | |||||||| |||||||||||| |||||||| ||||||||||||||||
Sbjct: 679 gaagggtgttctgctctatgggccacctggtacaggaaaaacattgttggctagggcagt 738

                                                  
Query: 255 tgcgcaccatactgattgtacattcatcagggtgtctgg 293
           ||| |||||||||||||||||||||||||||||||||||
Sbjct: 739 tgcacaccatactgattgtacattcatcagggtgtctgg 777


>gnl|LJGI|TC61103 similar to UniRef100_A7PU25 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 761

 Score =  149 bits (75), Expect = 1e-35
 Identities = 75/75 (100%)
 Strand = Plus / Plus

                                                                       
Query: 295 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 497

                          
Query: 355 aagcagtgctaggta 369
           |||||||||||||||
Sbjct: 498 aagcagtgctaggta 512


>gnl|LJGI|TC72992 similar to UniRef100_A7PU25 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 746

 Score =  147 bits (74), Expect = 6e-35
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                       
Query: 295 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 409

                         
Query: 355 aagcagtgctaggt 368
           ||||||||||||||
Sbjct: 410 aagcagtgctaggt 423


>gnl|LJGI|GO023739 similar to UniRef100_A7PU25 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 702

 Score =  143 bits (72), Expect = 9e-34
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                       
Query: 295 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 340

                       
Query: 355 aagcagtgctag 366
           ||||||||||||
Sbjct: 341 aagcagtgctag 352


>gnl|LJGI|TC82699 similar to UniRef100_A7PU25 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 1314

 Score =  143 bits (72), Expect = 9e-34
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                       
Query: 295 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aagagaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaagg 373

                       
Query: 355 aagcagtgctag 366
           ||||||||||||
Sbjct: 374 aagcagtgctag 385


>gnl|LJGI|TC58932 similar to UniRef100_A7PU25 Cluster: Chromosome chr7 scaffold_31,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_31, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (87%)
          Length = 856

 Score =  113 bits (57), Expect = 8e-25
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                       
Query: 298 agaacaagtacttgtggatttcaaacaagtagatgctcatgtgcatcagtacgaaggaag 357
           ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 340 agaacaagtacctgtggatttcaaacaaatagatgctcatgtgcatcagtacaaaggaag 399

                    
Query: 358 cagtgctag 366
           |||||||||
Sbjct: 400 cagtgctag 408


>gnl|LJGI|DC593315 homologue to UniRef100_A7P5J9 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 575

 Score =  103 bits (52), Expect = 7e-22
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                       
Query: 135 ggtcattgaggtaccaattaaacatcctgagttgtttgaaagtcctggaatagcacaacc 194
           |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 47  ggtcattgggctaccaattaaacatcctgagctgtttgaaagtcctggaatagcacaacc 106

               
Query: 195 aaag 198
           ||||
Sbjct: 107 aaag 110


>gnl|LJGI|GO011139 homologue to UniRef100_A7QET1 Cluster: Chromosome chr16 scaffold_86
            whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep:, partial (2%)
          Length = 641

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 88  gtccaagcatatgttatttcaccagaagaagagctaaggttttggagggt 137
           |||||||||||||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 80  gtccaagcatatgttatttcgccagaagaaaagctaaggtttgggagggt 129


>gnl|LJGI|BP040285 
          Length = 437

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 88  gtccaagcatatgttatttcaccagaaga 116
           |||||||||||||||||||||||| ||||
Sbjct: 278 gtccaagcatatgttatttcaccacaaga 250


>gnl|LJGI|TC78243 
          Length = 704

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 88  gtccaagcatatgttatttcaccagaaga 116
           |||||||||||||||||||||||| ||||
Sbjct: 244 gtccaagcatatgttatttcaccacaaga 272