Miyakogusa Predicted Gene

Lj1g3v1708950.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1708950.1 Non Chatacterized Hit- tr|G2QQ30|G2QQ30_THIHA
Uncharacterized protein OS=Thielavia heterothallica
(s,23.65,0.0000000007,Pumilio-like repeats,Pumilio RNA-binding repeat;
PUF,Pumilio RNA-binding repeat; seg,NULL; ARM repea,gene.g31839.t1.1
         (1356 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS324567 similar to UniRef100_Q9SD33 Cluster: UPF0183 p...   131   1e-29
gnl|LJGI|TC67232                                                      117   2e-25

>gnl|LJGI|FS324567 similar to UniRef100_Q9SD33 Cluster: UPF0183 protein At3g51130;
           n=1; Arabidopsis thaliana|Rep: UPF0183 protein At3g51130
           - Arabidopsis thaliana (Mouse-ear cress), partial (6%)
          Length = 817

 Score =  131 bits (66), Expect = 1e-29
 Identities = 135/158 (85%)
 Strand = Plus / Plus

                                                                       
Query: 811 aagtatcttctgaatgaggtggcaaacaactcgtttggcatagccaaagataagactggg 870
           |||||| |||||| |||||||||  | ||||| |||||  ||||||||||||||| ||| 
Sbjct: 497 aagtattttctgagtgaggtggcggataactcttttgggttagccaaagataagagtgga 556

                                                                       
Query: 871 tgctgtgtgctgcagcagtgcattctccatgctattggagaaaccaaaatgaggctgatt 930
           || || |||||||||||||||||| ||||||| |  ||||||||||||||| || |||||
Sbjct: 557 tgttgagtgctgcagcagtgcattatccatgcaaggggagaaaccaaaatgcggttgatt 616

                                                 
Query: 931 gctgatgtcattgtaaatgcttccctcctagctgagga 968
           |||||| |||  ||||||||||| |||||||| |||||
Sbjct: 617 gctgatatcacagtaaatgcttctctcctagccgagga 654


>gnl|LJGI|TC67232 
          Length = 743

 Score =  117 bits (59), Expect = 2e-25
 Identities = 122/143 (85%)
 Strand = Plus / Plus

                                                                       
Query: 811 aagtatcttctgaatgaggtggcaaacaactcgtttggcatagccaaagataagactggg 870
           |||||| |||||| |||||||||  | ||||| |||||  ||||||||||||||| ||| 
Sbjct: 598 aagtattttctgagtgaggtggcggataactcttttgggttagccaaagataagagtgga 657

                                                                       
Query: 871 tgctgtgtgctgcagcagtgcattctccatgctattggagaaaccaaaatgaggctgatt 930
           || || |||||||||||||||||| ||||||| |  ||||||||||||||| || |||||
Sbjct: 658 tgttgagtgctgcagcagtgcattatccatgcaaggggagaaaccaaaatgcggttgatt 717

                                  
Query: 931 gctgatgtcattgtaaatgcttc 953
           |||||| |||  |||||||||||
Sbjct: 718 gctgatatcacagtaaatgcttc 740