Miyakogusa Predicted Gene
- Lj1g3v1698940.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1698940.2 tr|G8A2C0|G8A2C0_MEDTR Natural
resistance-associated macrophage protein OS=Medicago truncatula
GN=MT,83.39,0,nramp: metal ion transporter, metal ion
(Mn2+/Fe2+,Natural resistance-associated macrophage
protein;,CUFF.27695.2
(1626 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BI418224 homologue to UniRef100_Q7X9B8 Cluster: Ferrous... 125 9e-28
gnl|LJGI|BI420728 homologue to UniRef100_Q7X9B8 Cluster: Ferrous... 125 9e-28
gnl|LJGI|TC66340 similar to UniRef100_Q7X9B8 Cluster: Ferrous io... 125 9e-28
gnl|LJGI|TC60215 similar to UniRef100_Q7X9B8 Cluster: Ferrous io... 60 5e-08
gnl|LJGI|TC81525 similar to UniRef100_Q9SNV9 Cluster: Metal tran... 58 2e-07
>gnl|LJGI|BI418224 homologue to UniRef100_Q7X9B8 Cluster: Ferrous ion membrane
transport protein DMT1; n=1; Glycine max|Rep: Ferrous
ion membrane transport protein DMT1 - Glycine max
(Soybean), partial (30%)
Length = 558
Score = 125 bits (63), Expect = 9e-28
Identities = 258/323 (79%)
Strand = Plus / Plus
Query: 172 ttttcatggaagaagctatggatgttcacagggccagggttcttgatgagcatagcgttt 231
||||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||
Sbjct: 146 ttttcatggaagaagctatggcggttcacagggccagggtttctcatgtgcatagcgttt 205
Query: 232 ttggatccagggaatctggaaggggatctgcaagctggtgccatcgccggttactcgctg 291
| ||||| ||||| ||||| ||||| | ||||| |||||||| || || |||||| ||
Sbjct: 206 ctcgatccggggaacctggagggggacttacaagcgggtgccattgcagggtactcgttg 265
Query: 292 ctatggctgttgatgtgggctaccttcatgggtctcttgattcagcttctttctctcagg 351
|| ||||| |||||||||||||| |||||| || | |||||||| | || ||
Sbjct: 266 ctgtggcttttgatgtgggctactggcatggggctgctaattcagctcttgtcggcgcgg 325
Query: 352 gtcggcgtcgccaccggccgccacctcgccgagctctgtagggaccactatccaaattgg 411
| || ||||||||||| ||| | || ||||| || ||||| | || || | |||
Sbjct: 326 cttggagtcgccaccgggaagcacttggcggagctgtgcagggaggagtaccccacgtgg 385
Query: 412 gctcgtcttgtgctgtggttcatggctgaggttgctttgattggtgctgatattcaagag 471
||| | | ||||||||| | ||||||||||||||| | |||||| ||||||||||||||
Sbjct: 386 gctaggatggtgctgtgggttatggctgaggttgctctcattggttctgatattcaagag 445
Query: 472 gttattggtagtgccattgcgat 494
|||||||||||||| ||||||||
Sbjct: 446 gttattggtagtgctattgcgat 468
>gnl|LJGI|BI420728 homologue to UniRef100_Q7X9B8 Cluster: Ferrous ion membrane
transport protein DMT1; n=1; Glycine max|Rep: Ferrous
ion membrane transport protein DMT1 - Glycine max
(Soybean), partial (25%)
Length = 516
Score = 125 bits (63), Expect = 9e-28
Identities = 258/323 (79%)
Strand = Plus / Plus
Query: 172 ttttcatggaagaagctatggatgttcacagggccagggttcttgatgagcatagcgttt 231
||||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||
Sbjct: 184 ttttcatggaagaagctatggcggttcacagggccagggtttctcatgtgcatagcgttt 243
Query: 232 ttggatccagggaatctggaaggggatctgcaagctggtgccatcgccggttactcgctg 291
| ||||| ||||| ||||| ||||| | ||||| |||||||| || || |||||| ||
Sbjct: 244 ctcgatccggggaacctggagggggacttacaagcgggtgccattgcagggtactcgttg 303
Query: 292 ctatggctgttgatgtgggctaccttcatgggtctcttgattcagcttctttctctcagg 351
|| ||||| |||||||||||||| |||||| || | |||||||| | || ||
Sbjct: 304 ctgtggcttttgatgtgggctactggcatggggctgctaattcagctcttgtcggcgcgg 363
Query: 352 gtcggcgtcgccaccggccgccacctcgccgagctctgtagggaccactatccaaattgg 411
| || ||||||||||| ||| | || ||||| || ||||| | || || | |||
Sbjct: 364 cttggagtcgccaccgggaagcacttggcggagctgtgcagggaggagtaccccacgtgg 423
Query: 412 gctcgtcttgtgctgtggttcatggctgaggttgctttgattggtgctgatattcaagag 471
||| | | ||||||||| | ||||||||||||||| | |||||| ||||||||||||||
Sbjct: 424 gctaggatggtgctgtgggttatggctgaggttgctctcattggttctgatattcaagag 483
Query: 472 gttattggtagtgccattgcgat 494
|||||||||||||| ||||||||
Sbjct: 484 gttattggtagtgctattgcgat 506
>gnl|LJGI|TC66340 similar to UniRef100_Q7X9B8 Cluster: Ferrous ion membrane transport
protein DMT1; n=1; Glycine max|Rep: Ferrous ion membrane
transport protein DMT1 - Glycine max (Soybean), partial
(66%)
Length = 1129
Score = 125 bits (63), Expect = 9e-28
Identities = 258/323 (79%)
Strand = Plus / Plus
Query: 172 ttttcatggaagaagctatggatgttcacagggccagggttcttgatgagcatagcgttt 231
||||||||||||||||||||| |||||||||||||||||| | ||| |||||||||||
Sbjct: 175 ttttcatggaagaagctatggcggttcacagggccagggtttctcatgtgcatagcgttt 234
Query: 232 ttggatccagggaatctggaaggggatctgcaagctggtgccatcgccggttactcgctg 291
| ||||| ||||| ||||| ||||| | ||||| |||||||| || || |||||| ||
Sbjct: 235 ctcgatccggggaacctggagggggacttacaagcgggtgccattgcagggtactcgttg 294
Query: 292 ctatggctgttgatgtgggctaccttcatgggtctcttgattcagcttctttctctcagg 351
|| ||||| |||||||||||||| |||||| || | |||||||| | || ||
Sbjct: 295 ctgtggcttttgatgtgggctactggcatggggctgctaattcagctcttgtcggcgcgg 354
Query: 352 gtcggcgtcgccaccggccgccacctcgccgagctctgtagggaccactatccaaattgg 411
| || ||||||||||| ||| | || ||||| || ||||| | || || | |||
Sbjct: 355 cttggagtcgccaccgggaagcacttggcggagctgtgcagggaggagtaccccacgtgg 414
Query: 412 gctcgtcttgtgctgtggttcatggctgaggttgctttgattggtgctgatattcaagag 471
||| | | ||||||||| | ||||||||||||||| | |||||| ||||||||||||||
Sbjct: 415 gctaggatggtgctgtgggttatggctgaggttgctctcattggttctgatattcaagag 474
Query: 472 gttattggtagtgccattgcgat 494
|||||||||||||| ||||||||
Sbjct: 475 gttattggtagtgctattgcgat 497
Score = 69.9 bits (35), Expect = 5e-11
Identities = 163/203 (80%), Gaps = 2/203 (0%)
Strand = Plus / Plus
Query: 956 tatttgtcacaacagtttttgctaagggtttttatggtac-gaagcaggcagatagcata 1014
||||||| ||||| || ||||| ||||| ||||||||| | |||| || ||||||||||
Sbjct: 908 tatttgtgacaactgtgtttgccaaggggttttatggttctgaagtag-cagatagcatt 966
Query: 1015 ggattggtgaatgcagggcagtatcttgaggaaaagtatggaggaggggtcttccctatt 1074
|| | || |||||||| ||||||||| |||| |||||| || || || | || |||
Sbjct: 967 ggtcttgtaaatgcaggacagtatcttcaggacgcgtatggtggtggagtagttccaatt 1026
Query: 1075 ctttatatatggggaatcgggttattggcagctggacagagtagcactatcactggaaca 1134
| ||||||||||| || |||||||||||||| || || ||||||||||| |||| ||
Sbjct: 1027 ttatatatatggggtattgggttattggcagccggccaaagtagcactattgctggtact 1086
Query: 1135 tatgccgggcaattcattatggg 1157
|||||||| ||||| || |||||
Sbjct: 1087 tatgccggacaatttatcatggg 1109
>gnl|LJGI|TC60215 similar to UniRef100_Q7X9B8 Cluster: Ferrous ion membrane transport
protein DMT1; n=1; Glycine max|Rep: Ferrous ion membrane
transport protein DMT1 - Glycine max (Soybean), partial
(48%)
Length = 1349
Score = 60.0 bits (30), Expect = 5e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1080 tatatggggaatcgggttattggcagctggacagagtagcactatcactggaacatatgc 1139
||||||||| || || ||||| ||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 1082 tatatggggtattggtttattagcagccggacaaagtagcactattactggtacttatgc 1141
Query: 1140 cgggcaattcattatggg 1157
|||||||| || |||||
Sbjct: 1142 tgggcaatttatcatggg 1159
>gnl|LJGI|TC81525 similar to UniRef100_Q9SNV9 Cluster: Metal transporter Nramp3; n=1;
Arabidopsis thaliana|Rep: Metal transporter Nramp3 -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 482
Score = 58.0 bits (29), Expect = 2e-07
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 215 tgatgagcatagcgtttttggatccagggaatctggaaggggatctgcaagctggtgcca 274
|||||||||| || ||| | ||||| |||||||| || |||||||| || |||||||||
Sbjct: 247 tgatgagcatcgcttttctcgatcctgggaatctcgagggggatcttcagtctggtgcca 306
Query: 275 tcgccggttactcgctgctatggct 299
| || || ||||||||||| |||||
Sbjct: 307 ttgctggctactcgctgctttggct 331