Miyakogusa Predicted Gene

Lj1g3v1697880.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1697880.1 tr|C4T9C1|C4T9C1_LOTJA SLEEPY1a OS=Lotus
japonicus GN=SLY1a PE=2 SV=1,100,4e-17,seg,NULL,CUFF.27690.1
         (315 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BU494440 weakly similar to UniRef100_A7PLH9 Cluster: Ch...   357   3e-98
gnl|LJGI|TC72096 similar to UniRef100_A7PLH9 Cluster: Chromosome...   113   7e-25

>gnl|LJGI|BU494440 weakly similar to UniRef100_A7PLH9 Cluster: Chromosome chr7
           scaffold_20, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (53%)
          Length = 493

 Score =  357 bits (180), Expect = 3e-98
 Identities = 180/180 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagcgttcacttccctccggcgaggataggaagatgaagaaggtgaaactggcagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  atgaagcgttcacttccctccggcgaggataggaagatgaagaaggtgaaactggcagaa 115

                                                                       
Query: 61  accgatgatgatggtgaaggagaagatgatgtttgtgggaagattcatggccctggcctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 accgatgatgatggtgaaggagaagatgatgtttgtgggaagattcatggccctggcctt 175

                                                                       
Query: 121 ggttgtttcgatgacaatcttctgttcgaggtgttgaagcacgtggatgcaaagtcgctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggttgtttcgatgacaatcttctgttcgaggtgttgaagcacgtggatgcaaagtcgctg 235


>gnl|LJGI|TC72096 similar to UniRef100_A7PLH9 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 799

 Score =  113 bits (57), Expect = 7e-25
 Identities = 72/77 (93%)
 Strand = Plus / Plus

                                                                       
Query: 223 cctcgtttggggaaagacgaggttcatctctccctctcgcttctctctattcggtactac 282
           ||||||||||||||||| |||||||||||||| || || |||||||| ||||||||||||
Sbjct: 489 cctcgtttggggaaagatgaggttcatctctcactgtcacttctctcaattcggtactac 548

                            
Query: 283 gagaagatgaatttcaa 299
           |||||||||||||||||
Sbjct: 549 gagaagatgaatttcaa 565