Miyakogusa Predicted Gene
- Lj1g3v1686750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1686750.1 tr|G7LG21|G7LG21_MEDTR Protein DCL OS=Medicago
truncatula GN=MTR_8g039170 PE=4 SV=1,39.47,6e-19,seg,NULL; no
description,Copper amine oxidase, N2/N3-terminal; DUF3223,Protein of
unknown function D,CUFF.27678.1
(579 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65623 similar to UniRef100_A7NU16 Cluster: Chromosome... 783 0.0
gnl|LJGI|TC61988 similar to UniRef100_A7NU16 Cluster: Chromosome... 488 e-137
gnl|LJGI|BW614571 similar to UniRef100_A7NU16 Cluster: Chromosom... 190 7e-48
>gnl|LJGI|TC65623 similar to UniRef100_A7NU16 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 622
Score = 783 bits (395), Expect = 0.0
Identities = 401/403 (99%)
Strand = Plus / Plus
Query: 177 ggagaatgaccccgacagtcggaaatggagggatattgaagaggagattctcagagacat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagaatgaccccgacagtcggaaatggagggatattgaagaggagattctcagagacat 60
Query: 237 tgaacccatcgttttgcttgccaaggacattcttcactcaccaaggtatatgaatggaca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacccatcgttttgcttgccaaggacattcttcactcaccaaggtatatgaatggaca 120
Query: 297 gatactggatatggaggaggagaaagctatagtagagaagcttcttgcttatcatccaga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatactggatatggaggaggagaaagctatagtagagaagcttcttgcttatcatccaga 180
Query: 357 atctgaagataagattgggtgtggtattgaatccattatggttgaccgtcaccctgaatt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctgaagataagattgggtgtggtattgaatccattatggttgaccgtcaccctgaatt 240
Query: 417 tcggcactcaaagcgtctttttgttgtaagaactgatggtgtttggatcgacttctccta 476
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 tcggcactcaaagcgtctttttgttgtgagaactgatggtgtttggatcgacttctccta 300
Query: 477 taattggtgccttcagagttacatcagatataagtaccctatccacgcagaaaggtttat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taattggtgccttcagagttacatcagatataagtaccctatccacgcagaaaggtttat 360
Query: 537 tcgaaaacattatcaccgtaaaaagtgtctttcaaggtagttg 579
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 tcgaaaacattaccaccgtaaaaagtgtctttcaaggtagttg 403
>gnl|LJGI|TC61988 similar to UniRef100_A7NU16 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 975
Score = 488 bits (246), Expect = e-137
Identities = 324/350 (92%)
Strand = Plus / Plus
Query: 198 gaaatggagggatattgaagaggagattctcagagacattgaacccatcgttttgcttgc 257
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 gaaatggagggataatgaagaggagattctcagggacattgaacccatcgttttgcttgc 217
Query: 258 caaggacattcttcactcaccaaggtatatgaatggacagatactggatatggaggagga 317
||||||||||||| ||| |||||||| ||| |||||||| ||||| || ||| ||||||
Sbjct: 218 caaggacattcttttctcgccaaggtacatggatggacaggtactgaatgtggcggagga 277
Query: 318 gaaagctatagtagagaagcttcttgcttatcatccagaatctgaagataagattgggtg 377
||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 278 gaaagctatagtagacaagctccttgcttaccatccagattctgaagataagattggatg 337
Query: 378 tggtattgaatccattatggttgaccgtcaccctgaatttcggcactcaaagcgtctttt 437
|||| |||||||||||||||||||||||||||| |||||| || |||||| | |||||||
Sbjct: 338 tggtcttgaatccattatggttgaccgtcaccccgaatttgggtactcaaggtgtctttt 397
Query: 438 tgttgtaagaactgatggtgtttggatcgacttctcctataattggtgccttcagagtta 497
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 398 tgttgtaagaactgatggtgtttggatcgacttctcctataagtggtgccttcagaatta 457
Query: 498 catcagatataagtaccctatccacgcagaaaggtttattcgaaaacatt 547
||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 458 catcagagataagtaccctatccacgcagaaaggtttattcaaaaacatt 507
Score = 65.9 bits (33), Expect = 3e-10
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 21 cagacaggttcttctgcttcgcggttgcttccaaaaccacactgccggagccgttgcggc 80
||||||| ||||||||||||||| | || |||| | || ||| ||| ||||||||| |||
Sbjct: 17 cagacagattcttctgcttcgcgctcgcctccatagccccaccgccagagccgttgtggc 76
Query: 81 gcgccaccggaagtggttcagcgccgccacaaactcaccgtcgaa 125
||| |||||| ||||| ||||||| |||| |||| ||||||||
Sbjct: 77 gcgtcaccggccgtggtgcagcgccaccacggactcgccgtcgaa 121
>gnl|LJGI|BW614571 similar to UniRef100_A7NU16 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 457
Score = 190 bits (96), Expect = 7e-48
Identities = 186/216 (86%)
Strand = Plus / Plus
Query: 195 tcggaaatggagggatattgaagaggagattctcagagacattgaacccatcgttttgct 254
|||||||||||||| || |||||||||||||||| ||||||||||| ||| | |||||
Sbjct: 236 tcggaaatggagggttaaagaagaggagattctcaaggacattgaacctatcatgttgct 295
Query: 255 tgccaaggacattcttcactcaccaaggtatatgaatggacagatactggatatggagga 314
| ||||| ||||| || || | || ||||||| ||||||||| |||| | |||||||
Sbjct: 296 tatgaaggatattctccattcgcgaaagtatatggatggacagagactgagtgtggagga 355
Query: 315 ggagaaagctatagtagagaagcttcttgcttatcatccagaatctgaagataagattgg 374
||||||| |||||| |||||||| ||||||||||||||| | |||||||||||||||||
Sbjct: 356 tgagaaagatatagtggagaagctacttgcttatcatccacactctgaagataagattgg 415
Query: 375 gtgtggtattgaatccattatggttgaccgtcaccc 410
|| |||| ||||||||||||||||||||||||||||
Sbjct: 416 gtctggtcttgaatccattatggttgaccgtcaccc 451
Score = 149 bits (75), Expect = 2e-35
Identities = 146/170 (85%), Gaps = 6/170 (3%)
Strand = Plus / Plus
Query: 1 atggcggctcctcttcttcgcagacaggttcttctgcttcgcggttgcttccaaaaccac 60
||||| ||||||||||||| |||||||||||| |||||||||| |||| |||| | ||||
Sbjct: 15 atggccgctcctcttcttctcagacaggttctcctgcttcgcgcttgcctccatagccac 74
Query: 61 actgccggagccgttgcggcgcgccaccggaagtggttcagcgccgccacaaactcaccg 120
|| ||| ||||||||| ||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 75 accgccagagccgttgtcgcgcgccaccgtctgtggtgcagcgccgccacgaactcaccg 134
Query: 121 tcgaatgaggctgaggcggaggagaaagtaagccccagcaccaccttcaa 170
||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 135 tcgaa------tgaggcggaggagaaagcaatccccagcaccaccttcaa 178