Miyakogusa Predicted Gene

Lj1g3v1686700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1686700.1 tr|Q2HTQ3|Q2HTQ3_MEDTR Cysteine proteinase
OS=Medicago truncatula GN=MTR_1g018840 PE=3
SV=1,65.71,0.0000000000002,seg,NULL,CUFF.27673.1
         (217 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77978 similar to UniRef100_A7NU11 Cluster: Chromosome...   117   3e-26

>gnl|LJGI|TC77978 similar to UniRef100_A7NU11 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 380

 Score =  117 bits (59), Expect = 3e-26
 Identities = 99/111 (89%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaacgcaatttgaaaacaaacagtgcagggaagtgtggaattgcaatgatggcctcc 60
           |||||||| |||||||| |||| || | |||| |||||||||||||||||| ||||||||
Sbjct: 376 atggaacgtaatttgaagacaagcaatacaggcaagtgtggaattgcaatgctggcctcc 317

                                                              
Query: 61  taccccataaagaaaggccaaaatcccccaaaccctggaccatctcctcct 111
           |||||||||||||||| ||||||| ||||||||| || | |||||||||||
Sbjct: 316 taccccataaagaaagcccaaaat-ccccaaaccttgaatcatctcctcct 267