Miyakogusa Predicted Gene
- Lj1g3v1650160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1650160.1 Non Chatacterized Hit- tr|K3YP74|K3YP74_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016066,41.88,4e-19,DUF3223,Protein of unknown function DUF3223;
no description,Copper amine oxidase, N2/N3-terminal; se,CUFF.27654.1
(681 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67174 similar to UniRef100_Q00M77 Cluster: Defective ... 735 0.0
>gnl|LJGI|TC67174 similar to UniRef100_Q00M77 Cluster: Defective chloroplast and
leaves protein; n=1; Glycine max|Rep: Defective
chloroplast and leaves protein - Glycine max (Soybean),
partial (61%)
Length = 1079
Score = 735 bits (371), Expect = 0.0
Identities = 378/379 (99%), Gaps = 1/379 (0%)
Strand = Plus / Plus
Query: 303 taaatgggttgactgggaggaccagattttggaggataccgttcctttggttggatttgt 362
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 380 taaatgggttgactgggaggaccagattttggaggataccgttcctt-ggttggatttgt 438
Query: 363 caggacgattcttcattctggacattatgaaagtggagatagactaagtccggagcatga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caggacgattcttcattctggacattatgaaagtggagatagactaagtccggagcatga 498
Query: 423 gaaaaccattcttgagaagctgcttccctttcatccagaatctgagaagaagatcggatg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gaaaaccattcttgagaagctgcttccctttcatccagaatctgagaagaagatcggatg 558
Query: 483 tggaattgattatataacgattggataccatcctcaatttgatcgatctaggtgtttgtt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggaattgattatataacgattggataccatcctcaatttgatcgatctaggtgtttgtt 618
Query: 543 catagtacggaaggatggagagctggttgacttttcatattggaaatgcattaagggttt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catagtacggaaggatggagagctggttgacttttcatattggaaatgcattaagggttt 678
Query: 603 gattagaaagaattatccattatatgcagacagtttcattctcagacacttcaggaagcg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gattagaaagaattatccattatatgcagacagtttcattctcagacacttcaggaagcg 738
Query: 663 gagtcgtaatctgtgaagt 681
|||||||||||||||||||
Sbjct: 739 gagtcgtaatctgtgaagt 757
Score = 315 bits (159), Expect = 2e-85
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 1 atggcttcttcatcttcttctccactgtccccaacacagtcacatatccactccctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggcttcttcatcttcttctccactgtccccaacacagtcacatatccactccctcggt 137
Query: 61 aacccttcttcctctttccgctcccctccgctcattctatctttccgtttctactggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 aacccttcttcctctttccgctcccctccgctcattctatctttccgtttctactggagc 197
Query: 121 gcctcgttgccacttcacactcgtctctccgctctcaaa 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gcctcgttgccacttcacactcgtctctccgctctcaaa 236
Score = 145 bits (73), Expect = 4e-34
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 194 acaatttgctacggaaaccgctaattactccgcggaaggacccagctggagttttggagg 253
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 acaatttgcttcggaaaccgctaattactccgcggaaggacccagctggagttttggagg 330
Query: 254 aacatgggtatgcctat 270
|||||||||||||||||
Sbjct: 331 aacatgggtatgcctat 347