Miyakogusa Predicted Gene

Lj1g3v1650100.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1650100.1 Non Chatacterized Hit- tr|D7LE70|D7LE70_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,50.43,2e-16,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL,TC62021.path1.1
         (367 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62021 similar to UniRef100_A7NTV4 Cluster: Chromosome...   728   0.0  
gnl|LJGI|TC70399 similar to UniRef100_A7NTV4 Cluster: Chromosome...    54   6e-07

>gnl|LJGI|TC62021 similar to UniRef100_A7NTV4 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 823

 Score =  728 bits (367), Expect = 0.0
 Identities = 367/367 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaaaggctgagaaggcaaaggaaggtaaattaggtgtagaacaagaattaagaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 atggaaaaggctgagaaggcaaaggaaggtaaattaggtgtagaacaagaattaagaaag 253

                                                                       
Query: 61  tggagagcagaaaatgagcagcgaagaaaggctggtgaatctggccatggagtgctaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tggagagcagaaaatgagcagcgaagaaaggctggtgaatctggccatggagtgctaaac 313

                                                                       
Query: 121 cagaataaaagccctaggggtagttttgaggggattaaggaaacaaattattttgaccgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cagaataaaagccctaggggtagttttgaggggattaaggaaacaaattattttgaccgg 373

                                                                       
Query: 181 gctcacggtgcagctagtcctgcacataacatgtcaagtccagaggcctatgaacatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gctcacggtgcagctagtcctgcacataacatgtcaagtccagaggcctatgaacatgaa 433

                                                                       
Query: 241 ggcaatgatgaaaatggatcatcatccccagaattaaaacatggaaagaagaagaaaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggcaatgatgaaaatggatcatcatccccagaattaaaacatggaaagaagaagaaaaga 493

                                                                       
Query: 301 tcattgttccctcgggttttgatgttctttgctagaagaaaaacacattcagccaagtca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcattgttccctcgggttttgatgttctttgctagaagaaaaacacattcagccaagtca 553

                  
Query: 361 gggtaaa 367
           |||||||
Sbjct: 554 gggtaaa 560


>gnl|LJGI|TC70399 similar to UniRef100_A7NTV4 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 851

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 37  ggtgtagaacaagaattaagaaagtggagagcagaaaatgagcagcgaagaaaggctgg 95
           ||||||||||||||||| ||||||||||| || ||| | ||||| || ||||| |||||
Sbjct: 96  ggtgtagaacaagaattgagaaagtggagggcggaacacgagcaacggagaaaagctgg 154



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 282 tggaaagaagaagaaaagatcattgttccctcgggttttgatgttctttgctagaagaaa 341
           ||||||||||||||| |  || || ||||| ||  |||||||||||||||| |||| |||
Sbjct: 320 tggaaagaagaagaagaagtcctttttcccgcgaattttgatgttctttgcaagaaaaaa 379

                                    
Query: 342 aacacattcagccaagtcagggtaa 366
           | ||||| || || | |||||||||
Sbjct: 380 atcacatccaacccattcagggtaa 404