Miyakogusa Predicted Gene
- Lj1g3v1638760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1638760.1 Non Chatacterized Hit- tr|I1K9P4|I1K9P4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52059
PE,69.96,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Homeodomain-like; seg,NULL; ZF_HD_DI,CUFF.27604.1
(817 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78439 839 0.0
gnl|LJGI|TC81711 similar to UniRef100_A7NUQ6 Cluster: Chromosome... 706 0.0
gnl|LJGI|TC72531 similar to UniRef100_A7NUQ6 Cluster: Chromosome... 157 1e-37
gnl|LJGI|TC75814 similar to UniRef100_Q9ARE4 Cluster: ZF-HD home... 133 2e-30
gnl|LJGI|TC71222 similar to UniRef100_A2Q1B8 Cluster: Homeobox d... 60 2e-08
gnl|LJGI|TC76609 similar to UniRef100_A7PMV8 Cluster: Chromosome... 58 9e-08
gnl|LJGI|BW607624 similar to UniRef100_A7PUT9 Cluster: Chromosom... 56 4e-07
gnl|LJGI|TC76197 similar to UniRef100_A7NUQ6 Cluster: Chromosome... 56 4e-07
gnl|LJGI|FS358799 similar to UniRef100_A7QCD8 Cluster: Chromosom... 54 1e-06
>gnl|LJGI|TC78439
Length = 621
Score = 839 bits (423), Expect = 0.0
Identities = 423/423 (100%)
Strand = Plus / Plus
Query: 77 tcgagatggggttcacggtggcgccgccgggatttgactcgctaggaaactcagctgcgc 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tcgagatggggttcacggtggcgccgccgggatttgactcgctaggaaactcagctgcgc 258
Query: 137 ggtccaaaacaggcggtggcatagaaccagaaggaggtgcagcagccaccgccttaggcg 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggtccaaaacaggcggtggcatagaaccagaaggaggtgcagcagccaccgccttaggcg 318
Query: 197 ttggtcgcaaaaatgggtccacagggacagtcagatacagagaatgtcaaaagaaccacg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttggtcgcaaaaatgggtccacagggacagtcagatacagagaatgtcaaaagaaccacg 378
Query: 257 ccgtcggtattggcggccacgccgtcgatggctgctgcgagtttctcgccgccggacagg 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccgtcggtattggcggccacgccgtcgatggctgctgcgagtttctcgccgccggacagg 438
Query: 317 aaggtacgctggaggccgtaatctgcgccgcctgtaactgccaccggaacttccaccgca 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaggtacgctggaggccgtaatctgcgccgcctgtaactgccaccggaacttccaccgca 498
Query: 377 aggagaccggcggcgaaatcacctcctaccagccacggccgccgcagcagcagccagcct 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aggagaccggcggcgaaatcacctcctaccagccacggccgccgcagcagcagccagcct 558
Query: 437 accaccaccaattctccccttactacccccgtgccgagccaccgccttccgccggctacc 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 accaccaccaattctccccttactacccccgtgccgagccaccgccttccgccggctacc 618
Query: 497 tcc 499
|||
Sbjct: 619 tcc 621
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 atggagtttgacgaccacgaagacctc 27
|||||||||||||||||||||||||||
Sbjct: 123 atggagtttgacgaccacgaagacctc 149
>gnl|LJGI|TC81711 similar to UniRef100_A7NUQ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 840
Score = 706 bits (356), Expect = 0.0
Identities = 358/359 (99%)
Strand = Plus / Plus
Query: 459 ctacccccgtgccgagccaccgccttccgccggctacctccaccatctggtgactccacc 518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaccnccgtgccgagccaccgccttccgccggctacctccaccatctggtgactccacc 60
Query: 519 gctgtcccagcaccggcccttggcccttccaccggcgggttccggcgggttcagaaggga 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgtcccagcaccggcccttggcccttccaccggcgggttccggcgggttcagaaggga 120
Query: 579 ggaggaagacatgtcgaacccgagcagcagcggcggaggaacgaagaaacggcacagaac 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaggaagacatgtcgaacccgagcagcagcggcggaggaacgaagaaacggcacagaac 180
Query: 639 aaggttcacgccggagcagaaggataagatgctggaatttgcggagagggtagggtggag 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggttcacgccggagcagaaggataagatgctggaatttgcggagagggtagggtggag 240
Query: 699 gatccagaagcatgatgaagctgcggtggagcagttctgtgaggaagcttgtatcaagag 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatccagaagcatgatgaagctgcggtggagcagttctgtgaggaagcttgtatcaagag 300
Query: 759 acatgttctcaaggtttggatgcataacaacaagcacactcttggtaagaaaccctaat 817
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acatgttctcaaggtttggatgcataacaacaagcacactcttggtaagaaaccctaat 359
>gnl|LJGI|TC72531 similar to UniRef100_A7NUQ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1297
Score = 157 bits (79), Expect = 1e-37
Identities = 142/163 (87%)
Strand = Plus / Plus
Query: 232 tacagagaatgtcaaaagaaccacgccgtcggtattggcggccacgccgtcgatggctgc 291
||||| ||||| || ||||||||||||||| | | ||||||||||||||||| || |||
Sbjct: 391 tacagggaatgccagaagaaccacgccgtcagcttcggcggccacgccgtcgacgggtgc 450
Query: 292 tgcgagtttctcgccgccggacaggaaggtacgctggaggccgtaatctgcgccgcctgt 351
|||||||| | || |||||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 451 tgcgagttcatggctgccggagatgaaggcacgctggaggctgtgatctgcgccgcctgt 510
Query: 352 aactgccaccggaacttccaccgcaaggagaccggcggcgaaa 394
||||| ||||||||||||||||||||||||| || ||||||||
Sbjct: 511 aactgtcaccggaacttccaccgcaaggagatcgacggcgaaa 553
Score = 119 bits (60), Expect = 3e-26
Identities = 147/176 (83%)
Strand = Plus / Plus
Query: 642 gttcacgccggagcagaaggataagatgctggaatttgcggagagggtagggtggaggat 701
||||||||||||||||||||| |||||||||| ||||| || | | || ||||| ||
Sbjct: 840 gttcacgccggagcagaaggagaagatgctggcttttgcagaagagcttggttggagaat 899
Query: 702 ccagaagcatgatgaagctgcggtggagcagttctgtgaggaagcttgtatcaagagaca 761
|||||||||| | |||||||| || || || ||||||| ||| ||||| | | |||| |
Sbjct: 900 ccagaagcatcaagaagctgctgttgaacaattctgtgctgaaacttgtgtgaggagaaa 959
Query: 762 tgttctcaaggtttggatgcataacaacaagcacactcttggtaagaaaccctaat 817
|||||||||||||||||||| || |||||| |||| |||||||||||||||||||
Sbjct: 960 cgttctcaaggtttggatgcacaataacaagaacacgcttggtaagaaaccctaat 1015
>gnl|LJGI|TC75814 similar to UniRef100_Q9ARE4 Cluster: ZF-HD homeobox protein; n=1;
Flaveria bidentis|Rep: ZF-HD homeobox protein - Flaveria
bidentis (Coastalplain yellowtops), partial (22%)
Length = 519
Score = 133 bits (67), Expect = 2e-30
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 661 gataagatgctggaatttgcggagagggtagggtggaggatccagaagcatgatgaagct 720
|||||||||||||| || |||||||| | || |||||||| |||||||||||||||| |
Sbjct: 1 gataagatgctggatttggcggagagattgggttggaggatgcagaagcatgatgaaggt 60
Query: 721 gcggtggagcagttctgtgaggaagcttgtatcaagagacatgttctcaaggtttggatg 780
| ||| || | |||||| | || || || ||||| | |||||||||||||||||||||
Sbjct: 61 gtggtccaggatttctgtaataaaactggtgtcaagcgtcatgttctcaaggtttggatg 120
Query: 781 cataacaacaagcacactcttggtaagaaacccta 815
||||||||||||||||||||||||||||| |||||
Sbjct: 121 cataacaacaagcacactcttggtaagaagcccta 155
>gnl|LJGI|TC71222 similar to UniRef100_A2Q1B8 Cluster: Homeobox domain, ZF-HD class;
ZF-HD homeobox protein Cys/His-rich dimerisation region;
Homeodomain-like; n=1; Medicago truncatula|Rep: Homeobox
domain, ZF-HD class; ZF-HD homeobox protein Cys/His-rich
dimerisation region; Homeodomain-like - Medicago
truncatula (Barrel medic), partial (18%)
Length = 598
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 763 gttctcaaggtttggatgcataacaacaagcacactcttggtaaga 808
|||||||| ||||||||||||||||||||| ||||| |||| ||||
Sbjct: 105 gttctcaaagtttggatgcataacaacaagaacacttttgggaaga 150
>gnl|LJGI|TC76609 similar to UniRef100_A7PMV8 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 615
Score = 58.0 bits (29), Expect = 9e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 664 aagatgctggaatttgcggagagggtagggtggaggatccagaag 708
||||||||||| |||||||||||||| ||||||| ||| ||||||
Sbjct: 2 aagatgctggagtttgcggagagggttgggtggaagatgcagaag 46
>gnl|LJGI|BW607624 similar to UniRef100_A7PUT9 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 476
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 653 agcagaaggataagatgctggaatttgcggagagggtagggtggaggatccagaagcatg 712
|||||||||||| |||| |||| ||||| |||| | | ||||||||||||||||| || |
Sbjct: 246 agcagaaggataggatgatggagtttgctgagaagattgggtggaggatccagaaacagg 187
Query: 713 atga 716
||||
Sbjct: 186 atga 183
>gnl|LJGI|TC76197 similar to UniRef100_A7NUQ6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 576
Score = 56.0 bits (28), Expect = 4e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 340 tgcgccgcctgtaactgccaccggaacttccaccgc 375
||||||||||| ||||||||||| ||||||||||||
Sbjct: 415 tgcgccgcctgcaactgccaccgcaacttccaccgc 450
>gnl|LJGI|FS358799 similar to UniRef100_A7QCD8 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 708
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 766 ctcaaggtttggatgcataacaacaagcaca 796
||||||||||||||||||||||| |||||||
Sbjct: 558 ctcaaggtttggatgcataacaataagcaca 528