Miyakogusa Predicted Gene

Lj1g3v1625460.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1625460.1 Non Chatacterized Hit- tr|I3S9I2|I3S9I2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.12,0,SUBFAMILY
NOT NAMED,NULL; SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING
PROTEIN,Protein of unknown fun,CUFF.27582.1
         (687 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60820 homologue to UniRef100_A7NTN3 Cluster: Chromoso...  1362   0.0  

>gnl|LJGI|TC60820 homologue to UniRef100_A7NTN3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 1152

 Score = 1362 bits (687), Expect = 0.0
 Identities = 687/687 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacggtgttccacttcttcaactgtgcgattctcaccttcggccctcacgccgtctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atgacggtgttccacttcttcaactgtgcgattctcaccttcggccctcacgccgtctat 223

                                                                       
Query: 61  tactccgccacacccttatcggagtatgatacccttggcacttctatcaaaaccgcggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tactccgccacacccttatcggagtatgatacccttggcacttctatcaaaaccgcggtt 283

                                                                       
Query: 121 gtttatctcgccacagcattagtcaagcttatttgtttggctacgtttcttaaggtttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gtttatctcgccacagcattagtcaagcttatttgtttggctacgtttcttaaggtttct 343

                                                                       
Query: 181 gagagtgatagctttgacccctatcaggaaattttgaaggcattaataggtttcatagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gagagtgatagctttgacccctatcaggaaattttgaaggcattaataggtttcatagat 403

                                                                       
Query: 241 gttgctgggctttactttgccctgacccagttgactcacaggaacatctctcaaaatcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gttgctgggctttactttgccctgacccagttgactcacaggaacatctctcaaaatcat 463

                                                                       
Query: 301 aaatttcaagctgttggacttggctgggcgttcgctgattctgtactgcatagattggct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aaatttcaagctgttggacttggctgggcgttcgctgattctgtactgcatagattggct 523

                                                                       
Query: 361 cctctttgggtgggtgctagaggattagaatttacttgggaatacattttgcagggcctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cctctttgggtgggtgctagaggattagaatttacttgggaatacattttgcagggcctt 583

                                                                       
Query: 421 gaggctaatgcaaatttggtgttgagcatatccctcgctgcattgggatctttgatgtgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaggctaatgcaaatttggtgttgagcatatccctcgctgcattgggatctttgatgtgg 643

                                                                       
Query: 481 ctcaggaaaaataaaccgaagaccctcattcctatcatatacttgtgtgctgggattgtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ctcaggaaaaataaaccgaagaccctcattcctatcatatacttgtgtgctgggattgtg 703

                                                                       
Query: 541 gcaaccatgccatctatcacaagctatctgaggcgagggttggggtggcatttgcccaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gcaaccatgccatctatcacaagctatctgaggcgagggttggggtggcatttgcccaaa 763

                                                                       
Query: 601 gtggttggttttgagctcttcacatcgttggtgatggcttttatcagttggcaactgttt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gtggttggttttgagctcttcacatcgttggtgatggcttttatcagttggcaactgttt 823

                                      
Query: 661 gctgtatgtcagagaccttcagtgtga 687
           |||||||||||||||||||||||||||
Sbjct: 824 gctgtatgtcagagaccttcagtgtga 850