Miyakogusa Predicted Gene
- Lj1g3v1582560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1582560.1 tr|B0XDK4|B0XDK4_CULQU Mitochondrial
2-oxoglutarate/malate carrier protein OS=Culex
quinquefasciatus,26.67,0.00000003,Mitochondrial carrier,Mitochondrial
carrier domain; MTUNCOUPLING,Mitochondrial brown fat uncoupling
,CUFF.27544.1
(933 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76598 similar to UniRef100_A7R0J1 Cluster: Chromosome... 997 0.0
gnl|LJGI|TC75811 similar to UniRef100_A7NUN8 Cluster: Chromosome... 837 0.0
gnl|LJGI|TC74732 homologue to UniRef100_A7R0J1 Cluster: Chromoso... 186 2e-46
gnl|LJGI|AV776491 similar to UniRef100_A7NUN8 Cluster: Chromosom... 168 4e-41
gnl|LJGI|AV771638 56 4e-07
>gnl|LJGI|TC76598 similar to UniRef100_A7R0J1 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (46%)
Length = 610
Score = 997 bits (503), Expect = 0.0
Identities = 520/523 (99%), Gaps = 2/523 (0%)
Strand = Plus / Plus
Query: 1 atgggtctcaagggattcttggaaggtggtgttgcttccatcgttgccggaaccaccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atgggtctcaagggattcttggaaggtggtgttgcttccatcgttgccggaaccaccact 147
Query: 61 cacccactcgacctcatcaaggttcgcatgcagcttcagggtgagaatctcccggcacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cacccactcgacctcatcaaggttcgcatgcagcttcagggtgagaatctcccggcacac 207
Query: 121 aatctccggccagctttcgcctttcactcacattcagccacccttcctcctcctcctccg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 208 aatctccggccagctttcgccttccactcacattcagccacccttcctcctcctcctccg 267
Query: 181 tcaggacccatctccgtcggcgtccgaatcatcagaacggaaggcgccgccgctctcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcaggacccatctccgtcggcgtccgaatcatcagaacggaaggcgccgccgctctcttc 327
Query: 241 tccggcgtctccgccaccgtgctccggcagactctctactccaccacccgcatgggtctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tccggcgtctccgccaccgtgctccggcagactctctactccaccacccgcatgggtctc 387
Query: 301 tacgacgtcctcaagcagaaatggagcgacccggagcgcggcaccatgccgctcacaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tacgacgtcctcaagcagaaatggagcgacccggagcgcggcaccatgccgctcacaagc 447
Query: 361 aagatcacggcgggacttatcgccggagggatcggcgccgccgtggggaacccc-gcgga 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 448 aagatcacggcgggacttatcgccggagggatcggcgccgccgtggggaaccccggcgga 507
Query: 420 tgttgcgatggtgcgtatgcaggctgatgggagactcccggcggctcagcggcggaatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgttgcgatggtgcgtatgcaggctgatgggagactcccggcggctcagcggcggaatta 567
Query: 480 taa-gggagttttcgacgcgatccggcggatggcgggggaaga 521
||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 568 taaggggagttttcgacgcgatccggcggatggcgggggaaga 610
>gnl|LJGI|TC75811 similar to UniRef100_A7NUN8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 650
Score = 837 bits (422), Expect = 0.0
Identities = 422/422 (100%)
Strand = Plus / Plus
Query: 512 cgggggaagaggggattggttccctgtggcgcgggtcagggcttacggtgaaccgcgcga 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgggggaagaggggattggttccctgtggcgcgggtcagggcttacggtgaaccgcgcga 60
Query: 572 tgatcgtgacggcttctcagctggcgtcgtacgaccagttcaaggagacaattgttggga 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatcgtgacggcttctcagctggcgtcgtacgaccagttcaaggagacaattgttggga 120
Query: 632 aagggtggatgaacgatggtattgggacccacgtggcggcgagctttgcggcggggtttg 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagggtggatgaacgatggtattgggacccacgtggcggcgagctttgcggcggggtttg 180
Query: 692 tggcggcggtggcgtcgaacccggtggatgtgatcaagactagggttatgaacatgaagg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcggcggtggcgtcgaacccggtggatgtgatcaagactagggttatgaacatgaagg 240
Query: 752 tggatgctggggaggccccaccctacaatggggcattggattgtgcactcaagactgtta 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggatgctggggaggccccaccctacaatggggcattggattgtgcactcaagactgtta 300
Query: 812 aggctgaagggccattggcactttacaagggtttcatccctacaatttcaaggcagggtc 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggctgaagggccattggcactttacaagggtttcatccctacaatttcaaggcagggtc 360
Query: 872 ccttcactgttgttctgtttgtcactcttgaacaagttagaaagctcctcaaggagtttt 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttcactgttgttctgtttgtcactcttgaacaagttagaaagctcctcaaggagtttt 420
Query: 932 aa 933
||
Sbjct: 421 aa 422
>gnl|LJGI|TC74732 homologue to UniRef100_A7R0J1 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(90%)
Length = 1625
Score = 186 bits (94), Expect = 2e-46
Identities = 187/218 (85%)
Strand = Plus / Plus
Query: 538 tggcgcgggtcagggcttacggtgaaccgcgcgatgatcgtgacggcttctcagctggcg 597
|||||||| ||| ||| || ||||||||||||||| | |||||||| || |||||||||
Sbjct: 855 tggcgcggttcatcgctgactgtgaaccgcgcgatgctggtgacggcgtcgcagctggcg 914
Query: 598 tcgtacgaccagttcaaggagacaattgttgggaaagggtggatgaacgatggtattggg 657
|||||||||||||||||||||| ||| | | ||| || | |||| || || |||||
Sbjct: 915 tcgtacgaccagttcaaggagatgattctggagaagggtttgatgcgtgacgggcttggg 974
Query: 658 acccacgtggcggcgagctttgcggcggggtttgtggcggcggtggcgtcgaacccggtg 717
||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 975 acccacgtgacggcgagtttcgcggcggggtttgtggcggcggttgcgtcgaacccggtt 1034
Query: 718 gatgtgatcaagactagggttatgaacatgaaggtgga 755
|||||||| ||||| ||||| |||||||||||||||||
Sbjct: 1035 gatgtgattaagacgagggtgatgaacatgaaggtgga 1072
Score = 157 bits (79), Expect = 1e-37
Identities = 201/242 (83%), Gaps = 6/242 (2%)
Strand = Plus / Plus
Query: 235 ctcttctccggcgtctccgccaccgtgctccggcagactctctactccaccacccgcatg 294
|||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 558 ctcttctccggcgtctccgccaccgtcctccgtcagatgctgtactccaccacccgcatg 617
Query: 295 ggtctctacgacgtcctcaagcagaaatggagcgacccggagcgcggcaccatgccgctc 354
|| ||||||||| ||||||||||||| ||| | || |||| | ||||||||||
Sbjct: 618 ggcctctacgacatcctcaagcagaagtggtccaac------ggcggaaacatgccgctc 671
Query: 355 acaagcaagatcacggcgggacttatcgccggagggatcggcgccgccgtggggaacccc 414
|| |||||||| ||| ||||| |||||||| || ||||||||||| || || ||||||
Sbjct: 672 tcacgcaagatcgaggccggactcatcgccggtggaatcggcgccgctgttggcaacccc 731
Query: 415 gcggatgttgcgatggtgcgtatgcaggctgatgggagactcccggcggctcagcggcgg 474
|| || || || |||||||| |||||||| || ||||| ||||||||||| ||||| |||
Sbjct: 732 gccgacgtcgccatggtgcgaatgcaggccgacgggaggctcccggcggcgcagcgccgg 791
Query: 475 aa 476
||
Sbjct: 792 aa 793
>gnl|LJGI|AV776491 similar to UniRef100_A7NUN8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 531
Score = 168 bits (85), Expect = 4e-41
Identities = 169/197 (85%)
Strand = Plus / Minus
Query: 559 gtgaaccgcgcgatgatcgtgacggcttctcagctggcgtcgtacgaccagttcaaggag 618
||||||||||||||| | |||||||| || |||||||||||||||||||||||| |||||
Sbjct: 526 gtgaaccgcgcgatgctggtgacggcgtcgcagctggcgtcgtacgaccagttccaggag 467
Query: 619 acaattgttgggaaagggtggatgaacgatggtattgggacccacgtggcggcgagcttt 678
| ||| | | ||| || | |||| || || |||||||||||||| ||||||| ||
Sbjct: 466 atgattctggagaagggtttgatgcgtgacgggcttgggacccacgtgacggcgagtttc 407
Query: 679 gcggcggggtttgtggcggcggtggcgtcgaacccggtggatgtgatcaagactagggtt 738
||||||||||||||| ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 406 gcggcggggtttgtgtcggcggttgcgtcgaacccggttgatgtgattaagacgagggtg 347
Query: 739 atgaacatgaaggtgga 755
|||||||||||||||||
Sbjct: 346 atgaacatgaaggtgga 330
>gnl|LJGI|AV771638
Length = 549
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 235 ctcttctccggcgtctccgccaccgtgctccg 266
|||||||||||||||||||||||||| |||||
Sbjct: 516 ctcttctccggcgtctccgccaccgtcctccg 547
Score = 54.0 bits (27), Expect = 2e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 34 gcttccatcgttgccggaaccaccactcacccactcgacctcatcaaggttcgcatgcag 93
||||||||| | ||||| | | |||| ||||| || || ||||||||||| |||||||||
Sbjct: 267 gcttccatcatcgccggtagctccacccaccctctagatctcatcaaggtccgcatgcag 326
Query: 94 cttcagggtga 104
|| ||||||||
Sbjct: 327 ctccagggtga 337