Miyakogusa Predicted Gene
- Lj1g3v1562490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1562490.1 Non Chatacterized Hit- tr|B9F8U0|B9F8U0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.11,0.000000001,seg,NULL; Cyclin-like,Cyclin-like;
Cyclin_N,Cyclin, N-terminal; Cyclin_C,Cyclin, C-terminal;
CYCLINS,CUFF.27531.1
(1044 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75489 similar to UniRef100_Q6T2Z7 Cluster: Cyclin d2;... 769 0.0
gnl|LJGI|TC76987 similar to UniRef100_A8Y907 Cluster: D2/4-type ... 72 8e-12
>gnl|LJGI|TC75489 similar to UniRef100_Q6T2Z7 Cluster: Cyclin d2; n=1; Glycine max|Rep:
Cyclin d2 - Glycine max (Soybean), partial (35%)
Length = 501
Score = 769 bits (388), Expect = 0.0
Identities = 394/396 (99%)
Strand = Plus / Plus
Query: 649 gatgatggaagttcattaagttctttaatttcgcgatccacccaacttatattgagcact 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgatggaagttcattaagttctttaatttcgcgatccacccaacttatattgagcact 60
Query: 709 ataagagggcttgacttcttggcattcaaaccttcagagattgcagcagctgtggcaatg 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataagagggcttgacttcttggcattcaaaccttcagagattgcagcagctgtggcaatg 120
Query: 769 tatgtcgtgggggaaacccaatcagttgacactgacaaaacaatttccatcctgattcaa 828
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 tatgtcgtgggggaaacccaatcagttgacactgaccaaacaatttccatcctgattcaa 180
Query: 829 catgtagaaaaggagaggttaatgaagtgtgttgaaatgattcatgagctgtcatccaac 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catgtagaaaaggagaggttaatgaagtgtgttgaaatgattcatgagctgtcatccaac 240
Query: 889 aaggattcaagtgcttctgcaccttgtgtgccacaaagcccaataggtgtgttggaggct 948
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 aaggattcaagtgcttctgcaccttgtgtgccaccaagcccaataggtgtgttggaggct 300
Query: 949 gggtgcttcagctacaaaagtgatgttgacacaaatgctggttcttcatgttcttcagat 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggtgcttcagctacaaaagtgatgttgacacaaatgctggttcttcatgttcttcagat 360
Query: 1009 aatagcccaagtgctaaaaggaggaaactacactaa 1044
||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatagcccaagtgctaaaaggaggaaactacactaa 396
>gnl|LJGI|TC76987 similar to UniRef100_A8Y907 Cluster: D2/4-type cyclin; n=1; Populus
trichocarpa|Rep: D2/4-type cyclin - Populus trichocarpa
(Western balsam poplar) (Populus balsamiferasubsp.
trichocarpa), partial (66%)
Length = 1575
Score = 71.9 bits (36), Expect = 8e-12
Identities = 108/132 (81%)
Strand = Plus / Plus
Query: 505 gatttgcaggttgctgaatccaagtttttgtttgaggctaaaacaattcaaagaatggag 564
||||| ||||||| ||| | |||||| ||||||| |||||||| ||||||| ||||||
Sbjct: 750 gatttacaggttggagaaccaaagtttgtgtttgaagctaaaaccattcaaaaaatggaa 809
Query: 565 cttctggtcctgagcacattgaagtggaaaatgcaggctattactccattctcttttatt 624
|||||||| | |||||||||| ||||||||||| ||| | ||||| | ||||| |||
Sbjct: 810 cttctggtattaagcacattgagatggaaaatgcaagctttaactccttgttctttcatt 869
Query: 625 gattactacctt 636
|| |||| ||||
Sbjct: 870 gaatacttcctt 881