Miyakogusa Predicted Gene

Lj1g3v1561430.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1561430.1 Non Chatacterized Hit- tr|I1JV48|I1JV48_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51014 PE,83.43,0,WD AND
TETRATRICOPEPTIDE REPEAT PROTEIN 1,NULL; WD REPEAT DOMAIN-CONTAINING
FAMILY,NULL; WD40,WD40 r,CUFF.27527.1
         (1008 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS333406 similar to UniRef100_Q10QQ8 Cluster: Expressed...   942   0.0  
gnl|LJGI|GO012854 similar to UniRef100_A7NUQ1 Cluster: Chromosom...   105   5e-22

>gnl|LJGI|FS333406 similar to UniRef100_Q10QQ8 Cluster: Expressed protein; n=1; Oryza
           sativa Japonica Group|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice), partial (13%)
          Length = 633

 Score =  942 bits (475), Expect = 0.0
 Identities = 488/491 (99%), Gaps = 1/491 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggactctgttccctttcgcgatggcaacatacacaaactgctccagacacgttacctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atggactctgttccctttcgcgatggcaacatacacaaactgctccagacacgttacctc 202

                                                                       
Query: 61  aacactcgtctagatgttaatcatactttgcagacacactcttcgttgattcggaggctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aacactcgtctagatgttaatcatactttgcagacacactcttcgttgattcggaggctt 262

                                                                       
Query: 121 tctcaagacagagagttagagggccaccttggctgtgttaatgcggtggcttggaattcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctcaagacagagagttagagggccaccttggctgtgttaatgcggtggcttggaattcc 322

                                                                       
Query: 181 acaggttcaatgctgatatctggatcagatgatacaaggatcaatatttggagctactct 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 323 acaggttcaatgctgatatctggatcaaatgatacaaggatcaatatttggagctactct 382

                                                                       
Query: 241 agtaaaaaacttttgcattcaattgatactggacattctgcaaatatattctgtaccaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agtaaaaaacttttgcattcaattgatactggacattctgcaaatatattctgtaccaag 442

                                                                       
Query: 301 tttgtaccagaaacttctgatgagcttgtagtctctggagctggagatgctgaagttcgg 360
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tttgtaccaaaaacttctgatgagcttgtagtctctggagctggagatgctgaagttcgg 502

                                                                       
Query: 361 ttatttaacctgtctcgcttaagtgggagagggttcagtgatgaggccattgctccattc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttatttaacctgtctcgcttaagtgggagagggttcagtgatgaggccattgctccattc 562

                                                                       
Query: 421 gcactttatcaatgtcacagtcgaagagt-caagaaattggctgttgaaaatggaaatcc 479
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 563 gcactttatcaatgtcacagtcgaagagtccaagaaattggctgttgaaaatggaaatcc 622

                      
Query: 480 caatgtggtgt 490
           |||||||||||
Sbjct: 623 caatgtggtgt 633


>gnl|LJGI|GO012854 similar to UniRef100_A7NUQ1 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 667

 Score =  105 bits (53), Expect = 5e-22
 Identities = 60/61 (98%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                        
Query: 949  cagtatactccagaagacgttt-caaagctgatgacatactctccaacaattaatggggt 1007
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1    cagtatactccagaagacgttttcaaagctgatgacatactctccaacaattaatggggt 60

             
Query: 1008 a 1008
            |
Sbjct: 61   a 61