Miyakogusa Predicted Gene
- Lj1g3v1560060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1560060.1 tr|G7J535|G7J535_MEDTR MscS family inner membrane
protein ynaI OS=Medicago truncatula GN=MTR_3g10028,83.4,0,seg,NULL;
Sm-like ribonucleoproteins,Like-Sm (LSM) domain;
MS_channel,Mechanosensitive ion channel M,CUFF.27580.1
(1410 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS362116 similar to UniRef100_A6XN19 Cluster: Expressed... 833 0.0
gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed... 333 2e-90
gnl|LJGI|BP052864 244 1e-63
>gnl|LJGI|FS362116 similar to UniRef100_A6XN19 Cluster: Expressed protein; n=1; Prunus
persica|Rep: Expressed protein - Prunus persica (Peach),
partial (6%)
Length = 553
Score = 833 bits (420), Expect = 0.0
Identities = 420/420 (100%)
Strand = Plus / Minus
Query: 991 gatagctcagttgagaagacctccaaaaccatgcaaccgaaaaaggaaagtgcaggagat 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gatagctcagttgagaagacctccaaaaccatgcaaccgaaaaaggaaagtgcaggagat 494
Query: 1051 gtaagaaagggaagtgcagtacctgcatctaaaaacctttcacaaagtgctgtgcctgaa 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtaagaaagggaagtgcagtacctgcatctaaaaacctttcacaaagtgctgtgcctgaa 434
Query: 1111 atttctcctgttacatcccatgagtctggtactgcttcgcagtcaaagcaagatggagag 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atttctcctgttacatcccatgagtctggtactgcttcgcagtcaaagcaagatggagag 374
Query: 1171 aaatcttctgtaacttcatcacctgttaggtctcctttggaggagaacattcttcttgag 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaatcttctgtaacttcatcacctgttaggtctcctttggaggagaacattcttcttgag 314
Query: 1231 gttgctcttgaaggctcaaagcgaactcttccaattgaggaagaaatgacttcatctcct 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gttgctcttgaaggctcaaagcgaactcttccaattgaggaagaaatgacttcatctcct 254
Query: 1291 acacctgcagagtcacaagaatttgctgtccaaaggaatgggagtggacctccttctaac 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acacctgcagagtcacaagaatttgctgtccaaaggaatgggagtggacctccttctaac 194
Query: 1351 aaggataagaaggatggtcctatatcttcatttccaactactaagcagaatgagtagatt 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aaggataagaaggatggtcctatatcttcatttccaactactaagcagaatgagtagatt 134
>gnl|LJGI|AV422180 similar to UniRef100_A6XN19 Cluster: Expressed protein; n=1; Prunus
persica|Rep: Expressed protein - Prunus persica (Peach),
partial (20%)
Length = 424
Score = 333 bits (168), Expect = 2e-90
Identities = 345/404 (85%)
Strand = Plus / Plus
Query: 136 cttgcaggtcgcgagatattcacgaacttcctttcaagtataatgattcatgcgacccgg 195
||||||||||| |||||||| || ||||||||||||||| ||||||| || || || ||
Sbjct: 17 cttgcaggtcgtgagatatttacaaacttcctttcaagtgtaatgatccacgcaactcgt 76
Query: 196 ccatttattttaaacgagtggattcaaacaaagattgaaggatatgaggtttctggtacc 255
|||||| | | || ||| ||||| |||| |||||| |||||||||||||||||||||
Sbjct: 77 ccatttgtggtgaatgagcggattaaaacgaagattaaaggatatgaggtttctggtaaa 136
Query: 256 gttgagcatgtaggctggtggtcaccaaccattgtgagaggtgatgatcgtgaggcagtt 315
||||||||||| || |||||||||||||| | || ||||||| |||| |||| ||||||
Sbjct: 137 gttgagcatgtgggatggtggtcaccaacactagttagaggtgctgattgtgaagcagtt 196
Query: 316 catattcctaatcacaagttcactgtaaatgttgttagaaatcttagtcagaaaactcat 375
|||||||||||||||||||| | |||||||||||| || ||||||||| |||| |||||
Sbjct: 197 catattcctaatcacaagttgagtgtaaatgttgtgaggaatcttagtatgaaatctcat 256
Query: 376 tggcgtatcaagagttacattgctatcagtcacttggatgttaacaaaattaatattatt 435
||||| || |||| | | ||||||| |||||| ||||||||| ||| ||||||| |||
Sbjct: 257 tggcgcattaagactcatcttgctattagtcacatggatgttagcaagattaatagtatc 316
Query: 436 gtagctgatatgcgcaaggttttggctaaaaatcctcaagtagagcagcaaagattgcac 495
||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 317 atagctgatatgcggaaggttttggcgaaaaatcctcaagtagagcagaaaaaattgcac 376
Query: 496 agaagggtctttttggagaatgtaaatcctgaaaatcagtctct 539
|||||||| ||||||||| || | ||||| ||||||||| ||||
Sbjct: 377 agaagggtttttttggaggatatcaatccagaaaatcaggctct 420
>gnl|LJGI|BP052864
Length = 380
Score = 244 bits (123), Expect = 1e-63
Identities = 181/195 (92%), Gaps = 4/195 (2%)
Strand = Plus / Minus
Query: 1220 ttcttcttgaggttgctcttgaaggctcaaagcgaactcttccaattgaggaagaaatga 1279
|||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 377 ttcttcttgaggttgctcttgaaggctccaagcgactgcttcccattgaggaagaaatga 318
Query: 1280 ctt-cat-ctcctacacctgcagagt-cacaagaatttgctgt-ccaaaggaatgggagt 1335
||| ||| |||||||||||||||||| ||| |||||||||||| || |||||||||||||
Sbjct: 317 cttgcatgctcctacacctgcagagtgcaccagaatttgctgtgcccaaggaatgggagt 258
Query: 1336 ggacctccttctaacaaggataagaaggatggtcctatatcttcatttccaactactaag 1395
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 257 ggacctccttctaaccaggataagaaggatggtcctatatcttcatttcccactactaag 198
Query: 1396 cagaatgagtagatt 1410
| |||||||||||||
Sbjct: 197 ccgaatgagtagatt 183