Miyakogusa Predicted Gene
- Lj1g3v1548700.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1548700.3 tr|G7J4K4|G7J4K4_MEDTR Neurobeachin OS=Medicago
truncatula GN=MTR_3g100060 PE=4 SV=1,87.54,0,Beige/BEACH domain,BEACH
domain; WD40 repeats,WD40 repeat; BEACH domain,BEACH domain; WD40
repeat-li,CUFF.27610.3
(6735 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033680 similar to UniRef100_A7NUK9 Cluster: Chromosom... 1112 0.0
gnl|LJGI|TC71444 similar to UniRef100_A7NUK7 Cluster: Chromosome... 944 0.0
gnl|LJGI|DC592905 similar to UniRef100_UPI000034F4BB Cluster: WD... 860 0.0
gnl|LJGI|AV406672 similar to UniRef100_A7NUK9 Cluster: Chromosom... 402 e-110
>gnl|LJGI|BP033680 similar to UniRef100_A7NUK9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 582
Score = 1112 bits (561), Expect = 0.0
Identities = 582/585 (99%), Gaps = 3/585 (0%)
Strand = Plus / Plus
Query: 327 aaacttccctagacatggaacaatgggtctgttcagttttcttacagaaaatggaagagg 386
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaacttccctagacatg-aacaatgggtctgttcagttttcttacagaaaatggaagagg 59
Query: 387 gtcgttggctgtgcttgcaagggagaagctcacttatgagtcaatcaacctgaagagaca 446
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtcgt-ggctgtgct-gcaagggagaagctcacttatgagtcaatcaacctgaagagaca 117
Query: 447 gcgtgtggacctgcacgttaatttagtcaggaggcgatggcattttctttgcataactca 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gcgtgtggacctgcacgttaatttagtcaggaggcgatggcattttctttgcataactca 177
Query: 507 tagcatcggaagagcattttctgcgggtagcttgttgagatgttacctggatggtgatct 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tagcatcggaagagcattttctgcgggtagcttgttgagatgttacctggatggtgatct 237
Query: 567 tgtttcatctgaaagatgcaggtatgcaaaaatcagcgaatcattaacaagttgcacgat 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgtttcatctgaaagatgcaggtatgcaaaaatcagcgaatcattaacaagttgcacgat 297
Query: 627 tggtgctaaacttaagatgcctcactatgaagacaatgcgccctcgttcgaatctatccg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tggtgctaaacttaagatgcctcactatgaagacaatgcgccctcgttcgaatctatccg 357
Query: 687 tgattcatgcccgttttctggccaaattggtcctgtttatttgcttaacgatgccatttc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgattcatgcccgttttctggccaaattggtcctgtttatttgcttaacgatgccatttc 417
Query: 747 ttctgaacaagtacagagtatctactctcttggtccgagttatatgtactctttccttga 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttctgaacaagtacagagtatctactctcttggtccgagttatatgtactctttccttga 477
Query: 807 taatgaagccttacctctttctggtgataaactgccgggtgggattcttgatgccaaaga 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 taatgaagccttacctctttctggtgataaactgccgggtgggattcttgatgccaaaga 537
Query: 867 tggtctcgcatctagaattatctttggactcaatgcacaggcaag 911
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tggtctcgcatctagaattatctttggactcaatgcacaggcaag 582
>gnl|LJGI|TC71444 similar to UniRef100_A7NUK7 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 1171
Score = 944 bits (476), Expect = 0.0
Identities = 492/495 (99%), Gaps = 3/495 (0%)
Strand = Plus / Plus
Query: 6241 gttagtcatgagcttgatataataatcagtggatcgaaagatggaacttgtgtattccat 6300
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttagtcatgagcttgatat--taatcagtggatcgaaagatggaacttgtgtattccat 58
Query: 6301 accctgcgagaaggtagatatgtcagatccttaaggcatccagcaggtagtccaatatca 6360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 accctgcgagaaggtagatatgtcagatccttaaggcatccagcaggtagtccaatatca 118
Query: 6361 aagctggctgtctctcagcatggtcagattgtgatttatgctgatgatgatcttagtttg 6420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 aagctggctgtctctcagcatggtcagattgtgatttatgctgatgatgatcttagtttg 178
Query: 6421 cacctttattcaataaatggaaaacatcttgcttcctctgaatccaatggacgccttaat 6480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 cacctttattcaataaatggaaaacatcttgcttcctctgaatccaatggacgccttaat 238
Query: 6481 actatccaattgagcaaatgtggcgagtttttggtagctgctggtgaccaggggcagatt 6540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 actatccaattgagcaaatgtggcgagtttttggtagctgctggtgaccaggggcagatt 298
Query: 6541 gttgttcgctctatgaacacccttgaacttgttaagaaatatcatggagttggaaagatt 6600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gttgttcgctctatgaacacccttgaacttgttaagaaatatcatggagttggaaagatt 358
Query: 6601 ttgacatctctagcagtaacccaagaagaatgcttcttagctggcacaaaggatggaagt 6660
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttgacatctctagcagtaa-ccaagaagaatgcttcttagctggcacaaaggatggaagt 417
Query: 6661 ctccttgtctattctatagaaaaccctcagctccggaaaactagccacaacaaaaatata 6720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ctccttgtctattctatagaaaaccctcagctccggaaaactagccacaacaaaaatata 477
Query: 6721 aaatcaaaacagtaa 6735
|||||||||||||||
Sbjct: 478 aaatcaaaacagtaa 492
>gnl|LJGI|DC592905 similar to UniRef100_UPI000034F4BB Cluster: WD-40 repeat family
protein / beige-related; n=1; Arabidopsis thaliana|Rep:
WD-40 repeat family protein / beige-related - Arabidopsis
thaliana, partial (10%)
Length = 591
Score = 860 bits (434), Expect = 0.0
Identities = 434/434 (100%)
Strand = Plus / Plus
Query: 4514 agataaaagctgttcattggactcggtatttgctcagatatactgcgatagagattttct 4573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 agataaaagctgttcattggactcggtatttgctcagatatactgcgatagagattttct 217
Query: 4574 tcagtgattctgtttcccctgtatttctgaactttgcatcacagaaggatgcaaaagata 4633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcagtgattctgtttcccctgtatttctgaactttgcatcacagaaggatgcaaaagata 277
Query: 4634 taggaaacttgattgttactacaagaaatgaatattcactatccaaaggaagtggaaggg 4693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 taggaaacttgattgttactacaagaaatgaatattcactatccaaaggaagtggaaggg 337
Query: 4694 ataagagtggatctattaattttgtagatcgaagagtagcacaagaaatggttgaaactg 4753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ataagagtggatctattaattttgtagatcgaagagtagcacaagaaatggttgaaactg 397
Query: 4754 ccagagaaagctggaggagaagggacataacaaactttgagtatttgatgattctcaata 4813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ccagagaaagctggaggagaagggacataacaaactttgagtatttgatgattctcaata 457
Query: 4814 cacttgctggaagatcttataatgatttgacccagtatcctgtctttccttgggtcctgg 4873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cacttgctggaagatcttataatgatttgacccagtatcctgtctttccttgggtcctgg 517
Query: 4874 ctgattactcgtcagaggttcttgattataacagatcatctacatttcgagatctgtcaa 4933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctgattactcgtcagaggttcttgattataacagatcatctacatttcgagatctgtcaa 577
Query: 4934 agcctgttggagca 4947
||||||||||||||
Sbjct: 578 agcctgttggagca 591
>gnl|LJGI|AV406672 similar to UniRef100_A7NUK9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 223
Score = 402 bits (203), Expect = e-110
Identities = 218/223 (97%)
Strand = Plus / Plus
Query: 1900 ttcctaggaaggcttttggttggcctaccatctgagaagaaggggtcaagattcttcaat 1959
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccttggaaggcttttggttggcctaccatctgagaagaaggggtcaagattcttcaat 60
Query: 1960 ctcccaatgggtagatccagatctatattggaaagccaaaggaaaatcagaatgcaacca 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcccaatgggtagatccagatctatattggaaagccaaaggaaaatcagaatgcaacca 120
Query: 2020 attttcttggctatatctgataggcattttacctttccacagccatataatctatgtgct 2079
||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||
Sbjct: 121 attttcttggctatatctgataggctttttagctttccacagacagataatctatgtgct 180
Query: 2080 actttatttgatgttcttcttggtggtgctagccccaaacagg 2122
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actttatttgatgttcttcttggtggtgctagccccaaacagg 223