Miyakogusa Predicted Gene
- Lj1g3v1537650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1537650.1 tr|G7JSZ3|G7JSZ3_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_4g092510 PE=4
SV=1,47.66,1e-17,no description,NULL; F-box domain,F-box domain,
cyclin-like; RNI-like,NULL; FAMILY NOT NAMED,NULL; F,CUFF.27478.1
(1314 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 1265 0.0
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 821 0.0
gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 276 3e-73
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 167 2e-40
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 143 3e-33
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 101 1e-20
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 100 4e-20
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 84 3e-15
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy... 76 6e-13
gnl|LJGI|FS355262 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 66 6e-10
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy... 64 2e-09
gnl|LJGI|BW595051 weakly similar to UniRef100_A2Q574 Cluster: Cy... 56 6e-07
>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 732
Score = 1265 bits (638), Expect = 0.0
Identities = 638/638 (100%)
Strand = Plus / Plus
Query: 1 atgtctgattcaacggttgagatgttgattccgccgaaggcgaagccagaaatgcccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgtctgattcaacggttgagatgttgattccgccgaaggcgaagccagaaatgcccagc 154
Query: 61 cagagtgaaaatgaagatagtactgattcaacagttgagaaggcaaagcgaggaagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cagagtgaaaatgaagatagtactgattcaacagttgagaaggcaaagcgaggaagacat 214
Query: 121 agtgaaggtgaaagtgagagtgagagtaaagtgaacaatgacaggcttagtgatttgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 agtgaaggtgaaagtgagagtgagagtaaagtgaacaatgacaggcttagtgatttgccc 274
Query: 181 gattgcgttctgcttcacattttgtcatttgtgaaagccaggaatgcagttcaaacttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gattgcgttctgcttcacattttgtcatttgtgaaagccaggaatgcagttcaaacttgc 334
Query: 241 atattatccacaagatggaaggatctatggaaaagtcttccttcgctcattttactttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atattatccacaagatggaaggatctatggaaaagtcttccttcgctcattttactttcc 394
Query: 301 ccagacttttcgacattgaagattttcaccaaattcgtgtctaagcttttggaacttcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ccagacttttcgacattgaagattttcaccaaattcgtgtctaagcttttggaacttcgt 454
Query: 361 gatggctcactcccgctgcacagctttgattttgagcgtcatggttctattgagtatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gatggctcactcccgctgcacagctttgattttgagcgtcatggttctattgagtatatt 514
Query: 421 gtccacagacgggtagtagactatgctttgtcacataatgttcagcgattggcaatgact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gtccacagacgggtagtagactatgctttgtcacataatgttcagcgattggcaatgact 574
Query: 481 gtggaatatgactattgccacgtcgctcgcattttttcatgccagtctttaacatctctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtggaatatgactattgccacgtcgctcgcattttttcatgccagtctttaacatctctt 634
Query: 541 aagctttccgttcaccctaagcaatataatacttttagcacttcatttccaatatcttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aagctttccgttcaccctaagcaatataatacttttagcacttcatttccaatatcttca 694
Query: 601 tgtctgaatttgccagcattgaccagcttgcatctggt 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tgtctgaatttgccagcattgaccagcttgcatctggt 732
>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 718
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 901 gttaaagaattaagtatcgatgcatatatgggctcatattccccagagcctcctttggtt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttaaagaattaagtatcgatgcatatatgggctcatattccccagagcctcctttggtt 60
Query: 961 ctactcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaatact 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctactcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaatact 120
Query: 1021 cttcaggttctcttcttaattcctgacttagtgaaccgtaagctcccattcttaagtaac 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcaggttctcttcttaattcctgacttagtgaaccgtaagctcccattcttaagtaac 180
Query: 1081 ctgaagtcattgaaagttaaagtgcagcgactttcatatattcttagaatgacaatgata 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgaagtcattgaaagttaaagtgcagcgactttcatatattcttagaatgacaatgata 240
Query: 1141 gctgcgaagatacagaaagccactactgcgtcacggagagaagctgccaggttacggaaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctgcgaagatacagaaagccactactgcgtcacggagagaagctgccaggttacggaaa 300
Query: 1201 gaagctaaatacttagggaaaacaatatatgagcgtgcaccgatacctgctggaatagtg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagctaaatacttagggaaaacaatatatgagcgtgcaccgatacctgctggaatagtg 360
Query: 1261 gactttttgcttcaaaactcaccaacagcaaaagttgagaccaaaatgtgctaa 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gactttttgcttcaaaactcaccaacagcaaaagttgagaccaaaatgtgctaa 414
>gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (5%)
Length = 536
Score = 276 bits (139), Expect = 3e-73
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 1176 gagagaagctgccaggttacggaaagaagctaaatacttagggaaaacaatatatgagcg 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gagagaagctgccaggttacggaaagaagctaaatacttagggaaaacaatatatgagcg 477
Query: 1236 tgcaccgatacctgctggaatagtggactttttgcttcaaaactcaccaacagcaaaagt 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgcaccgatacctgctggaatagtggactttttgcttcaaaactcaccaacagcaaaagt 417
Query: 1296 tgagaccaaaatgtgctaa 1314
|||||||||||||||||||
Sbjct: 416 tgagaccaaaatgtgctaa 398
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 167 bits (84), Expect = 2e-40
Identities = 159/184 (86%)
Strand = Plus / Plus
Query: 128 gtgaaagtgagagtgagagtaaagtgaacaatgacaggcttagtgatttgcccgattgcg 187
|||| ||||||||||| | | ||| |||||| || || || ||||| ||||| |||||||
Sbjct: 350 gtgagagtgagagtgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcg 409
Query: 188 ttctgcttcacattttgtcatttgtgaaagccaggaatgcagttcaaacttgcatattat 247
|||| ||||||||| ||||||||||||| |||| | |||||||||||||||||| |||||
Sbjct: 410 ttctccttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattat 469
Query: 248 ccacaagatggaaggatctatggaaaagtcttccttcgctcattttactttccccagact 307
||||||||||||||||||| |||||| |||||||||| ||||| ||| |||| |||| |
Sbjct: 470 ccacaagatggaaggatctctggaaacgtcttccttccctcatactacattcctcagatt 529
Query: 308 tttc 311
||||
Sbjct: 530 tttc 533
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 143 bits (72), Expect = 3e-33
Identities = 168/200 (84%)
Strand = Plus / Plus
Query: 169 agtgatttgcccgattgcgttctgcttcacattttgtcatttgtgaaagccaggaatgca 228
||||| ||||| |||||| |||| ||||||||| | |||||||||||||||| ||
Sbjct: 176 agtgacttgcctgattgcattctccttcacattctatcatttgtgaaagccaaagccgcg 235
Query: 229 gttcaaacttgcatattatccacaagatggaaggatctatggaaaagtcttccttcgctc 288
||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| |||
Sbjct: 236 gttcaaacttgcatattgtccacaagatggaaggatctctggaaacgtcttccttccctc 295
Query: 289 attttactttccccagacttttcgacattgaagattttcaccaaattcgtgtctaagctt 348
|| |||| ||| || |||||| ||||| |||| |||||||||||||||||| ||||
Sbjct: 296 atactactgtcctcaaacttttggacatataagagcttcaccaaattcgtgtctcggctt 355
Query: 349 ttggaacttcgtgatggctc 368
||| ||||| ||||||||
Sbjct: 356 ttgactcttcgcgatggctc 375
>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (6%)
Length = 881
Score = 101 bits (51), Expect = 1e-20
Identities = 123/147 (83%)
Strand = Plus / Plus
Query: 951 tcctttggttctactcagctggctggaagagcttactaatatcaaatcattgacagtctc 1010
||||||| || |||| |||||||||| ||||||||| ||||| |||||||||||||| ||
Sbjct: 243 tcctttgattttactgagctggctggtagagcttaccaatataaaatcattgacagtatc 302
Query: 1011 tacaaatactcttcaggttctcttcttaattcctgacttagtgaaccgtaagctcccatt 1070
| ||| |||||||||||||||||| |||||||| | ||| || | | |||||| | |
Sbjct: 303 tgcaagaactcttcaggttctcttcctaattcctcatttattggaactcaagctcacttc 362
Query: 1071 cttaagtaacctgaagtcattgaaagt 1097
||| |||| | ||||||||||||||||
Sbjct: 363 cttgagtagcttgaagtcattgaaagt 389
Score = 56.0 bits (28), Expect = 6e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1241 cgatacctgctggaatagtggactttttgcttcaaaactc 1280
||||||||| |||| ||||||||||||| |||||||||||
Sbjct: 518 cgatacctgatggagtagtggactttttacttcaaaactc 557
>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (23%)
Length = 714
Score = 99.6 bits (50), Expect = 4e-20
Identities = 155/190 (81%)
Strand = Plus / Plus
Query: 154 aacaatgacaggcttagtgatttgcccgattgcgttctgcttcacattttgtcatttgtg 213
||||| |||||||| ||||| |||| |||||| |||| |||||||||||||||||| ||
Sbjct: 192 aacaaagacaggctcagtgacttgcatgattgcattctccttcacattttgtcatttctg 251
Query: 214 aaagccaggaatgcagttcaaacttgcatattatccacaagatggaaggatctatggaaa 273
| |||| | ||||||| ||| ||||| ||||||| ||||||||||||||| ||||||
Sbjct: 252 agcgccaaatacgcagttcgaacatgcatgttatccaaaagatggaaggatctctggaaa 311
Query: 274 agtcttccttcgctcattttactttccccagacttttcgacattgaagattttcaccaaa 333
| ||||| || |||||||| ||| |||| ||| ||||| ||| |||||||||||
Sbjct: 312 cgccttccgaaccttattttactctcctcagattttgacacattcaagtttttcaccaaa 371
Query: 334 ttcgtgtcta 343
|| |||||||
Sbjct: 372 tttgtgtcta 381
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 atgtctgattcaacggttgagatgttgattccgccgaaggcgaag 45
|||||| |||||| || ||||||||||||||||||||| ||||||
Sbjct: 108 atgtctaattcaatggatgagatgttgattccgccgaatgcgaag 152
>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 1467
Score = 83.8 bits (42), Expect = 3e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 959 ttctactcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaata 1018
||||||| |||||||||| ||| ||||| ||||| ||||||||||| || || |||| ||
Sbjct: 1030 ttctacttagctggctggtagaccttaccaatataaaatcattgacggtttccacaagta 1089
Query: 1019 ctcttcaggttctcttcttaattcct 1044
|||||||||||||| ||| |||||||
Sbjct: 1090 ctcttcaggttctcatctcaattcct 1115
Score = 75.8 bits (38), Expect = 6e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 160 gacaggcttagtgatttgcccgattgcgttctgcttcacattttgtcatttgtgaaagcc 219
|||||||||||||| || || ||||| | || ||| ||||||| |||||||||||||||
Sbjct: 230 gacaggcttagtgacttacctgattgtatactcctttacattttatcatttgtgaaagcc 289
Query: 220 aggaatgcagttcaaacttgcatattatccacaagatggaaggatctatggaaa 273
| | | ||| ||||| ||| ||||||||| ||||||||||||||| ||||||
Sbjct: 290 aaacacgtagtccaaacatgcgtattatccaaaagatggaaggatctttggaaa 343
>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 555
Score = 75.8 bits (38), Expect = 6e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 160 gacaggcttagtgatttgcccgattgcgttctgcttcacattttgtcatttgtgaaagcc 219
|||||||| ||||| || ||||||||| | || |||||| ||||||||||| |||| |||
Sbjct: 189 gacaggctaagtgacttacccgattgcatcctccttcactttttgtcatttctgaacgcc 248
Query: 220 aggaatgcagttcaaacttgcatattatccacaagatggaaggatctatggaaa 273
| |||||||| |||| ||| |||||||||||||||||| |||| ||||||
Sbjct: 249 ggacgtgcagttcgaactaccatgttatccacaagatggaagaatctctggaaa 302
>gnl|LJGI|FS355262 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (6%)
Length = 654
Score = 65.9 bits (33), Expect = 6e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1246 cctgctggaatagtggactttttgcttcaaaactcaccaacagcaaaagttga 1298
|||| ||||||||||||||||||| ||||||| |||||| ||||| |||||||
Sbjct: 235 cctgatggaatagtggactttttgattcaaaattcaccatcagcagaagttga 183
Score = 52.0 bits (26), Expect = 9e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1165 actgcgtcacggagagaagctgccaggttacggaaagaagct 1206
|||| ||| |||| ||||||||||| ||||||||||||||||
Sbjct: 319 actgagtcgcggaaagaagctgccaagttacggaaagaagct 278
>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (24%)
Length = 859
Score = 63.9 bits (32), Expect = 2e-09
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 154 aacaatgacaggcttagtgatttgcccgattgcgttctgcttcacattttgtcatttgtg 213
||||| |||||||| ||||| | || ||| || |||| ||||||||||| |||||| ||
Sbjct: 171 aacaaagacaggctcagtgaccttcctgatggcattctccttcacattttatcatttatg 230
Query: 214 aaagccaggaatgcagttcaaacttgcatattatccacaagatggaaggatctatggaaa 273
|| |||| ||||||||||||| || || ||||| | |||||||||||||| ||||||
Sbjct: 231 aatgccaaatatgcagttcaaacatgtatcttatcggctagatggaaggatctctggaaa 290
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1 atgtctgattcaacggttgagatgttgattccgccgaaggcgaag 45
|||||| ||||||| | ||||||||||||||||||||| ||||||
Sbjct: 93 atgtctaattcaactgatgagatgttgattccgccgaatgcgaag 137
Score = 56.0 bits (28), Expect = 6e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 603 tctgaatttgccagcattgaccagcttgcatctggt 638
|||||||||||||||||| |||| ||||||||||||
Sbjct: 593 tctgaatttgccagcattaaccaccttgcatctggt 628
>gnl|LJGI|BW595051 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (9%)
Length = 474
Score = 56.0 bits (28), Expect = 6e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 959 ttctactcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaata 1018
|||| |||||||||||| |||||||| || |||| |||||||||| |||||| ||| ||
Sbjct: 381 ttctgctcagctggctgcaagagcttgctgatataaaatcattgattgtctctgcaagta 440
Query: 1019 ctct 1022
||||
Sbjct: 441 ctct 444