Miyakogusa Predicted Gene
- Lj1g3v1526320.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1526320.2 Non Chatacterized Hit- tr|I1NVC7|I1NVC7_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,43,4e-18,Multidrug resistance efflux transporter EmrE,NULL;
seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NA,CUFF.27480.2
(918 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77891 similar to UniRef100_A1L4X0 Cluster: At4g24460;... 1059 0.0
>gnl|LJGI|TC77891 similar to UniRef100_A1L4X0 Cluster: At4g24460; n=1; Arabidopsis
thaliana|Rep: At4g24460 - Arabidopsis thaliana
(Mouse-ear cress), partial (24%)
Length = 648
Score = 1059 bits (534), Expect = 0.0
Identities = 541/542 (99%), Gaps = 1/542 (0%)
Strand = Plus / Plus
Query: 1 atggcactttgttctccaacatcatcaccatcactccattctctcccgtcgcgtttccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggcactttgttctccaacatcatcaccatcactccattctctcccgtcgcgtttccca 98
Query: 61 tccccacggcgactccacggaggaacgacgctgtttccgccgcaacaacctcttctccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tccccacggcgactccacggaggaacgacgctgtttccgccgcaacaacctcttctccca 158
Query: 121 atggcgtcgtggtcgttatcttcttccaaaacaccgtctcagttaccttcttccactgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggcgtcgtggtcgttatcttcttccaaaacaccgtctcagttaccttcttccactgtc 218
Query: 181 aaactcaaccgtagccacaaccaccaccgaaacttcttcaaattccgcgcttccgcaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaactcaaccgtagccacaaccaccaccgaaacttcttcaaattccgcgcttccgcaacc 278
Query: 241 tcttcatcgggcagtggtagcggcggtgccagcgtcgttttgttgacctccaccgtcacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcttcatcgggcagtggtagcggcggtgccagcgtcgttttgttgacctccaccgtcacg 338
Query: 301 gtaacattagctgtagctaatcgagttctctacaaactcgctcttgttcccatgagtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtaacattagctgtagctaatcgagttctctacaaactcgctcttgttcccatgagtgat 398
Query: 361 tacccctttttcctcgctcagctcacaacttttggct-atgttgctgtgtattttagcat 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 399 tacccctttttcctcgctcagctcacaacttttggctcatgttgctgtgtattttagcat 458
Query: 420 cttgtatatccgataccggttagggattgttaccaatgagatgctggcgattccgaaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cttgtatatccgataccggttagggattgttaccaatgagatgctggcgattccgaaatg 518
Query: 480 gcggtttttgattatcgggtttttagaagctttgggagtggcttctggaatgtctgctgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gcggtttttgattatcgggtttttagaagctttgggagtggcttctggaatgtctgctgc 578
Query: 540 ag 541
||
Sbjct: 579 ag 580
Score = 141 bits (71), Expect = 9e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 577 cagacttatttagtttggcagctgatgttttctactcttctcttgaggagaaggtactca 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cagacttatttagtttggcagctgatgttttctactcttctcttgaggagaaggtactca 637
Query: 637 atcaaccaaat 647
|||||||||||
Sbjct: 638 atcaaccaaat 648