Miyakogusa Predicted Gene
- Lj1g3v1526270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1526270.1 tr|A9SK71|A9SK71_PHYPA Qc-SNARE, plant
SFT1-family OS=Physcomitrella patens subsp. patens GN=SFT1
PE,42.16,3e-17,no description,NULL; T_SNARE,Target SNARE coiled-coil
domain; SUBFAMILY NOT NAMED,NULL; GOLGI SNARE ,CUFF.27468.1
(402 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67188 weakly similar to UniRef100_Q8VXX9 Cluster: Bet... 797 0.0
gnl|LJGI|TC61567 weakly similar to UniRef100_Q8VXX9 Cluster: Bet... 797 0.0
gnl|LJGI|TC67541 295 1e-79
gnl|LJGI|BP064189 weakly similar to UniRef100_Q8VXX9 Cluster: Be... 170 4e-42
gnl|LJGI|GO036190 similar to UniRef100_A7Q219 Cluster: Chromosom... 98 5e-20
>gnl|LJGI|TC67188 weakly similar to UniRef100_Q8VXX9 Cluster: Bet1-like protein
At4g14600; n=1; Arabidopsis thaliana|Rep: Bet1-like
protein At4g14600 - Arabidopsis thaliana (Mouse-ear
cress), partial (88%)
Length = 639
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Plus
Query: 1 atgtcgttcaattcgcacagaggaccctcttcctacggcgacgctgcccctttccgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atgtcgttcaattcgcacagaggaccctcttcctacggcgacgctgcccctttccgatca 140
Query: 61 agagaagggcttagcacgagagcaggtgctgcctccgatgaaattcaattgcgtattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 agagaagggcttagcacgagagcaggtgctgcctccgatgaaattcaattgcgtattgat 200
Query: 121 cccgtcggggacatggacgatgaaatcaccggtcttcgtggccaagttcgaaaattgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccgtcggggacatggacgatgaaatcaccggtcttcgtggccaagttcgaaaattgaga 260
Query: 181 aatgttgccgaggagataggtacagaagtgaagtctcacagagattttctggaagtgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgttgccgaggagataggtacagaagtgaagtctcacagagattttctggaagtgatg 320
Query: 241 caaatgacaatgataaaggctcaagctggggtgaagaataacttaagaagattgaacaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaatgacaatgataaaggctcaagctggggtgaagaataacttaagaagattgaacaag 380
Query: 301 agcatcgtccaaaatggttcaaaccatattgttcatgtggttgtttttgcactaatctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatcgtccaaaatggttcaaaccatattgttcatgtggttgtttttgcactaatctgt 440
Query: 361 ttctccatagtgtacttttggtcaaagatttccagaaaatga 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctccatagtgtacttttggtcaaagatttccagaaaatga 482
>gnl|LJGI|TC61567 weakly similar to UniRef100_Q8VXX9 Cluster: Bet1-like protein
At4g14600; n=1; Arabidopsis thaliana|Rep: Bet1-like
protein At4g14600 - Arabidopsis thaliana (Mouse-ear
cress), partial (88%)
Length = 771
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Plus
Query: 1 atgtcgttcaattcgcacagaggaccctcttcctacggcgacgctgcccctttccgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atgtcgttcaattcgcacagaggaccctcttcctacggcgacgctgcccctttccgatca 206
Query: 61 agagaagggcttagcacgagagcaggtgctgcctccgatgaaattcaattgcgtattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 agagaagggcttagcacgagagcaggtgctgcctccgatgaaattcaattgcgtattgat 266
Query: 121 cccgtcggggacatggacgatgaaatcaccggtcttcgtggccaagttcgaaaattgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cccgtcggggacatggacgatgaaatcaccggtcttcgtggccaagttcgaaaattgaga 326
Query: 181 aatgttgccgaggagataggtacagaagtgaagtctcacagagattttctggaagtgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aatgttgccgaggagataggtacagaagtgaagtctcacagagattttctggaagtgatg 386
Query: 241 caaatgacaatgataaaggctcaagctggggtgaagaataacttaagaagattgaacaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 caaatgacaatgataaaggctcaagctggggtgaagaataacttaagaagattgaacaag 446
Query: 301 agcatcgtccaaaatggttcaaaccatattgttcatgtggttgtttttgcactaatctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agcatcgtccaaaatggttcaaaccatattgttcatgtggttgtttttgcactaatctgt 506
Query: 361 ttctccatagtgtacttttggtcaaagatttccagaaaatga 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttctccatagtgtacttttggtcaaagatttccagaaaatga 548
>gnl|LJGI|TC67541
Length = 766
Score = 295 bits (149), Expect = 1e-79
Identities = 319/375 (85%), Gaps = 3/375 (0%)
Strand = Plus / Plus
Query: 28 tcttcctacggcgacgctgcccctttccgatcaagagaagggcttagcacgagagcaggt 87
|||| |||||||| ||| ||||||| ||||||||| || |||||||| || || | |||
Sbjct: 273 tctttctacggcggcgccgccccttaccgatcaagcgatgggcttagtacccgacccggt 332
Query: 88 gctgcctccgatgaaattcaattgcgtattgatcccgtcggggacatggacgatgaaatc 147
||||||||||| || || |||||||||||||||||| | |||| |||||||||| ||
Sbjct: 333 gctgcctccgaggagatccaattgcgtattgatcccat---ggacttggacgatgagctc 389
Query: 148 accggtcttcgtggccaagttcgaaaattgagaaatgttgccgaggagataggtacagaa 207
|||||||||| | | |||||| ||| | | ||||||||| | ||||||||||| |||
Sbjct: 390 accggtcttcatagtcaagttagaaggctcaaaaatgttgctcaagagataggtactgaa 449
Query: 208 gtgaagtctcacagagattttctggaagtgatgcaaatgacaatgataaaggctcaagct 267
||||||| ||| | ||||||||||||| | ||||||||||||||||||| |||||||||
Sbjct: 450 gtgaagtatcagaaagattttctggaacagctgcaaatgacaatgataaaagctcaagct 509
Query: 268 ggggtgaagaataacttaagaagattgaacaagagcatcgtccaaaatggttcaaaccat 327
|| ||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 510 ggagtgaagaataatttaagaagattgaacaagagcaccatccaaagtggttcaaaccat 569
Query: 328 attgttcatgtggttgtttttgcactaatctgtttctccatagtgtacttttggtcaaag 387
||||||||||| || ||||||| || | ||||||| |||||||||| |||||||||||
Sbjct: 570 attgttcatgtcattctttttgcgttagtttgtttcttcatagtgtacctttggtcaaag 629
Query: 388 atttccagaaaatga 402
|| ||||||||||||
Sbjct: 630 atgtccagaaaatga 644
>gnl|LJGI|BP064189 weakly similar to UniRef100_Q8VXX9 Cluster: Bet1-like protein
At4g14600; n=1; Arabidopsis thaliana|Rep: Bet1-like
protein At4g14600 - Arabidopsis thaliana (Mouse-ear
cress), partial (63%)
Length = 407
Score = 170 bits (86), Expect = 4e-42
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 193 gagataggtacagaagtgaagtctcacagagattttctggaagtgatgcaaatgacaatg 252
||||||||||| |||||||||| || | ||||||||||||| | ||| |||||| |||
Sbjct: 345 gagataggtactgaagtgaagtatccgaaagattttctggaacagctgccaatgaccatg 286
Query: 253 ataaaggctcaagctggggtgaagaataacttaagaagattgaacaagagcatcgtccaa 312
||||| |||| |||||| ||||||||||| ||||||||||||||| |||||||| ||| |
Sbjct: 285 ataaaagctccagctggagtgaagaataatttaagaagattgaaccagagcatcatccca 226
Query: 313 aatggttcaaaccatattgttcatgtggttgtttttgcactaatctgtttctccatagtg 372
| |||||| ||||||||||||||||| || ||||||| || | ||||||| |||||||
Sbjct: 225 agtggttccaaccatattgttcatgtcattctttttgcgttagtttgtttcttcatagtg 166
Query: 373 tacttttggtcaaagatttccagaaaatga 402
||| ||||||| ||||| ||| ||||||||
Sbjct: 165 tacctttggtccaagatgtcccgaaaatga 136
>gnl|LJGI|GO036190 similar to UniRef100_A7Q219 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 623
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 184 gttgccgaggagataggtacagaagtgaagtctcacagagattttctggaagtgatg 240
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 165 gttgccgaagagataggtacagaagtgaagtctcacaaagattttctggaagtgatg 221