Miyakogusa Predicted Gene
- Lj1g3v1525930.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1525930.2 Non Chatacterized Hit- tr|I1MAX1|I1MAX1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,61.1,0,HLH,Helix-loop-helix domain; no
description,Helix-loop-helix domain; helix loop helix
domain,Helix-l,CUFF.27462.2
(918 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome... 920 0.0
gnl|LJGI|BP071162 similar to UniRef100_A7NUT0 Cluster: Chromosom... 438 e-122
gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome... 141 9e-33
gnl|LJGI|TC75292 similar to UniRef100_Q2HTN6 Cluster: Helix-loop... 62 6e-09
>gnl|LJGI|TC76917 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 539
Score = 920 bits (464), Expect = 0.0
Identities = 489/500 (97%)
Strand = Plus / Plus
Query: 1 atggcatttgaggctgtggttttcccacaagatcctgcattcacatatggttgcaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atggcatttgaggctgtggttttcccacaagatcctgcattcacatatggttgcaaaaat 99
Query: 61 gattactttttctctgcaacaactgctgttggagcatggggcaccaacaacaacaactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gattactttttctctgcaacaactgctgttggagcatggggcaccaacaacaacaactat 159
Query: 121 ggtctcctccaagcagcagaagaagaagaagnnnnnnnnctccttgaaatcatcatcaac 180
|||||||||||||||||||||||| || || |||||||||||||||||||||
Sbjct: 160 ggtctcctccaagcagcagaagaaaaaaaaaaaaaaaaactccttgaaatcatcatcaac 219
Query: 181 aacaacaacatggaccaggagcagaatctccattcaaataattgggattcttcttcccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aacaacaacatggaccaggagcagaatctccattcaaataattgggattcttcttcccac 279
Query: 241 acatcccctgaagcctgcacctttgatcaatcatctcctacaccattttcttcttctcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 acatcccctgaagcctgcacctttgatcaatcatctcctacaccattttcttcttctcgg 339
Query: 301 cgaaaacgacgtcgcaccaagagcgccaagaacatggaagaaatcgagaatcagaggatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cgaaaacgacgtcgcaccaagagcgccaagaacatggaagaaatcgagaatcagaggatg 399
Query: 361 acccacatcgcggttgaacgaaaccgccgcaaacagatgaacgagtacctttctgcgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acccacatcgcggttgaacgaaaccgccgcaaacagatgaacgagtacctttctgcgcta 459
Query: 421 agatctttgatgccttcttcttatgttcaaaggggtgaccaagcgtctattattggaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agatctttgatgccttcttcttatgttcaaaggggtgaccaagcgtctattattggaggt 519
Query: 481 gctattaactttgtgaagga 500
||||||||||||||||||||
Sbjct: 520 gctattaactttgtgaagga 539
>gnl|LJGI|BP071162 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 474
Score = 438 bits (221), Expect = e-122
Identities = 221/221 (100%)
Strand = Plus / Minus
Query: 698 tttcgaagaaacgaagaggaaacctcatgaagatcattggtgggattcaaagtctcagtc 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tttcgaagaaacgaagaggaaacctcatgaagatcattggtgggattcaaagtctcagtc 415
Query: 758 tcacaattcttcatcttaatgttaccactgtggatgatttagtcctttactcagtgagtc 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcacaattcttcatcttaatgttaccactgtggatgatttagtcctttactcagtgagtc 355
Query: 818 tcaaggtagaggaggagtgtcagctgagcacggtggatgaaatagcggccgccgtgaatc 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcaaggtagaggaggagtgtcagctgagcacggtggatgaaatagcggccgccgtgaatc 295
Query: 878 aactattatccatggtcggagaagaagtgactttcagttga 918
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aactattatccatggtcggagaagaagtgactttcagttga 254
>gnl|LJGI|TC80943 similar to UniRef100_A7NUT0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 770
Score = 141 bits (71), Expect = 9e-33
Identities = 143/167 (85%)
Strand = Plus / Plus
Query: 343 atcgagaatcagaggatgacccacatcgcggttgaacgaaaccgccgcaaacagatgaac 402
||||| || ||||||||||| ||||| || ||||| || || || | |||||||||||
Sbjct: 451 atcgaaaaccagaggatgactcacattgcagttgagcgcaatcgaaggaaacagatgaat 510
Query: 403 gagtacctttctgcgctaagatctttgatgccttcttcttatgttcaaaggggtgaccaa 462
|||||||| ||| ||| ||||| ||||||||| |||||||||| ||||||||||| |||
Sbjct: 511 gagtacctagctgtgctcagatccttgatgcctccttcttatgtacaaaggggtgatcaa 570
Query: 463 gcgtctattattggaggtgctattaactttgtgaaggagttagagca 509
|| ||||| ||||||||||| |||||||||||||||||| |||||||
Sbjct: 571 gcttctatcattggaggtgccattaactttgtgaaggagctagagca 617
>gnl|LJGI|TC75292 similar to UniRef100_Q2HTN6 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (24%)
Length = 675
Score = 61.9 bits (31), Expect = 6e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 448 caaaggggtgaccaagcgtctattattggaggtgctattaactttgt 494
||||||||||| ||||| ||||| |||||||| ||||||||||||||
Sbjct: 625 caaaggggtgatcaagcttctataattggaggggctattaactttgt 671