Miyakogusa Predicted Gene

Lj1g3v1525910.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1525910.1 Non Chatacterized Hit- tr|K3YV18|K3YV18_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018114,42.65,1e-17,seg,NULL; coiled-coil,NULL,CUFF.27434.1
         (978 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598733 weakly similar to UniRef100_A7NUT3 Cluster: Ch...   676   0.0  
gnl|LJGI|TC79018 similar to UniRef100_A7NUT3 Cluster: Chromosome...   474   e-133
gnl|LJGI|TC66852 similar to UniRef100_Q9XGG7 Cluster: Nodulin26-...   153   2e-36

>gnl|LJGI|DC598733 weakly similar to UniRef100_A7NUT3 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 476

 Score =  676 bits (341), Expect = 0.0
 Identities = 341/341 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatcttccaccacacatagaaaattacatcaagcaaaccatcgatgataccttggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atggatcttccaccacacatagaaaattacatcaagcaaaccatcgatgataccttggga 195

                                                                       
Query: 61  atctctgtacctccccaaaccctagcggcaaagcttcgagccacgcaagagtctcaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atctctgtacctccccaaaccctagcggcaaagcttcgagccacgcaagagtctcaattg 255

                                                                       
Query: 121 ctcctccgcgaccagaacctttcgttgctcgcgaaattgaaccacaaagaccaactcgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ctcctccgcgaccagaacctttcgttgctcgcgaaattgaaccacaaagaccaactcgtc 315

                                                                       
Query: 181 caacgcctcaagtctgaatcggatatgaacgcgcgagctttgaagaagtttgttgaggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 caacgcctcaagtctgaatcggatatgaacgcgcgagctttgaagaagtttgttgaggag 375

                                                                       
Query: 241 aataatcggctggcgtcggagtgtgagaatttggtggctgaatgccagaagtgggagcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aataatcggctggcgtcggagtgtgagaatttggtggctgaatgccagaagtgggagcat 435

                                                    
Query: 301 gaaatcgcgctctatgaacatgatagggacgcgttgatgga 341
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaaatcgcgctctatgaacatgatagggacgcgttgatgga 476


>gnl|LJGI|TC79018 similar to UniRef100_A7NUT3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 463

 Score =  474 bits (239), Expect = e-133
 Identities = 239/239 (100%)
 Strand = Plus / Plus

                                                                       
Query: 740 atatcatattggatgagaagaacaagaagatattgaagcaactcaaggaagggaagcatc 799
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atatcatattggatgagaagaacaagaagatattgaagcaactcaaggaagggaagcatc 60

                                                                       
Query: 800 cgggttctgggggaaagcataccagcagcgcatctgccaagtcaaacaagagaaagacca 859
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgggttctgggggaaagcataccagcagcgcatctgccaagtcaaacaagagaaagacca 120

                                                                       
Query: 860 gtccaagaacaactagcccaatggagaggaagattgattttggcgaattagaatcagcta 919
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtccaagaacaactagcccaatggagaggaagattgattttggcgaattagaatcagcta 180

                                                                      
Query: 920 gacagccattatcacccttacggcataactccccggactgtagaatggtcaagaagtaa 978
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacagccattatcacccttacggcataactccccggactgtagaatggtcaagaagtaa 239


>gnl|LJGI|TC66852 similar to UniRef100_Q9XGG7 Cluster: Nodulin26-like major intrinsic
           protein; n=1; Pisum sativum|Rep: Nodulin26-like major
           intrinsic protein - Pisum sativum (Garden pea), partial
           (29%)
          Length = 1009

 Score =  153 bits (77), Expect = 2e-36
 Identities = 119/133 (89%)
 Strand = Plus / Plus

                                                                       
Query: 708 tgaggaggaggtaaaattactgtttgaggaaaatatcatattggatgagaagaacaagaa 767
           |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| | ||
Sbjct: 167 tgaggaggaggtaaaagtactgtttgaggagaatataatattggatgagaagaaccaaaa 226

                                                                       
Query: 768 gatattgaagcaactcaaggaagggaagcatccgggttctgggggaaagcataccagcag 827
            |||||||||||| | ||||||| ||||||||| |||||| |||||| |||||| |||||
Sbjct: 227 aatattgaagcaattaaaggaagtgaagcatccaggttctaggggaaggcatactagcag 286

                        
Query: 828 cgcatctgccaag 840
            ||||||||||||
Sbjct: 287 tgcatctgccaag 299