Miyakogusa Predicted Gene
- Lj1g3v1525840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1525840.1 tr|A4PIT0|A4PIT0_PHAVU Isoamylase-type
starch-debranching enzyme 3 OS=Phaseolus vulgaris GN=PvISA3
P,83.69,0,no description,Immunoglobulin-like fold; no
description,Glycoside hydrolase, catalytic domain; no de,CUFF.27435.1
(2259 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO025541 homologue to UniRef100_Q105A0 Cluster: Isoamyl... 1346 0.0
gnl|LJGI|FS326080 similar to UniRef100_A4PIT0 Cluster: Isoamylas... 1263 0.0
gnl|LJGI|GO035993 similar to UniRef100_A4PIT0 Cluster: Isoamylas... 1086 0.0
gnl|LJGI|TC69421 similar to UniRef100_A4PIT0 Cluster: Isoamylase... 842 0.0
>gnl|LJGI|GO025541 homologue to UniRef100_Q105A0 Cluster: Isoamylase isoform 3; n=1;
Pisum sativum|Rep: Isoamylase isoform 3 - Pisum sativum
(Garden pea), partial (31%)
Length = 703
Score = 1346 bits (679), Expect = 0.0
Identities = 698/703 (99%), Gaps = 1/703 (0%)
Strand = Plus / Plus
Query: 1177 atagataataaggtttattacatggtagacgataacgggcagttgatgaacttctctggc 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atagataataaggtttattacatggtagacgataacgggcagttgatgaacttctctggc 61
Query: 1237 tgtggaaatacattgaattgtaaccatcctgtggtcatggagctaattctcgacagccta 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgtggaaatacattgaattgtaaccatcctgtggtcatggagctaattctcgacagccta 121
Query: 1297 agacactgggtcattgaatatcatgtggatggatttcgatttgatcttgcaagtgtccta 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agacactgggtcattgaatatcatgtggatggatttcgatttgatcttgcaagtgtccta 181
Query: 1357 tgtcgaggagtagatggctccccccttaatgctcccccacttattagggcaattgctaaa 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgtcgaggagtagatggctccccccttaatgctcccccacttattagggcaattgctaaa 241
Query: 1417 gatgcagttttgtcaaggtgtaaaattattgcagagccttgggactgtggaggtctctat 1476
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 242 gatgcagttttgtcaaggtgtaaaattattgcagagccttggggctgtggaggtctctat 301
Query: 1477 cttgttggaagttttcccaattgggatcggtgggctgaatggaatgggaaatatcgcgat 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cttgttggaagttttcccaattgggatcggtgggctgaatggaatgggaaatatcgcgat 361
Query: 1537 gatgtgcggaaatttatcaagggcgattctggtatgaaggggggctttgcgactcgtgtt 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gatgtgcggaaatttatcaagggcgattctggtatgaaggggggctttgcgactcgtgtt 421
Query: 1597 tctgggtcttctgatctttacagagtgaacaagcgtagaccatatcatggtattaacttt 1656
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 422 tctgggtcttctgatctttacagagtgagcaagcgtagaccatatcatggtattaacttt 481
Query: 1657 gttattgcacatgatgggttcagcttgcgtgatcttgtttcatacaatttcaagcacaat 1716
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 482 gttattgcacatgatgggttcagtttgcgtgatcttgtttcatacaatttcaagcacaat 541
Query: 1717 gaggccaatggggaaggtggacaagatggaagcaatgataattttagctggaattgtggt 1776
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaggccaatggggagggtggacaagatggaagcaatgataattttagctggaattgtggt 601
Query: 1777 tttgaaggagaaactgatgatgctagtataagagctttgcggtcaagacaaatgaaaaac 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tttgaaggagaaactgatgatgctagtataagagctttgcggtcaagacaaatgaaaaac 661
Query: 1837 ttccatttggcattaatgatatctcagggcacaccgatgatgt 1879
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 662 ttccatttggcattaatgatatctca-ggcacaccgatgatgt 703
>gnl|LJGI|FS326080 similar to UniRef100_A4PIT0 Cluster: Isoamylase-type
starch-debranching enzyme 3; n=1; Phaseolus
vulgaris|Rep: Isoamylase-type starch-debranching enzyme
3 - Phaseolus vulgaris (Kidney bean) (French bean),
partial (20%)
Length = 752
Score = 1263 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Plus
Query: 1 atgcttcaccacccattactctgcggttccagacccgccactcactccacactcttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgcttcaccacccattactctgcggttccagacccgccactcactccacactcttcgct 175
Query: 61 tcgcttttctccgacggcaacaacgccggtcgcagttcacttgccggaaactcgttttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tcgcttttctccgacggcaacaacgccggtcgcagttcacttgccggaaactcgttttgc 235
Query: 121 cgtgaaatcaggttgaagttcatgaagcaagcttcgggaagcaaatcgaatcataatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cgtgaaatcaggttgaagttcatgaagcaagcttcgggaagcaaatcgaatcataatggt 295
Query: 181 cgcggagtttatagtgagacaacggaccgcgccaagcttaggacaactaatgtttatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cgcggagtttatagtgagacaacggaccgcgccaagcttaggacaactaatgtttatagt 355
Query: 241 ggtcgtgctcaggaaggggtgcttgaggaagatgtctccaaagtgatagagaacagacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggtcgtgctcaggaaggggtgcttgaggaagatgtctccaaagtgatagagaacagacca 415
Query: 301 acatgggaaatttccccaggacaggcagttccattgggtgtatcacaagttgacaatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 acatgggaaatttccccaggacaggcagttccattgggtgtatcacaagttgacaatgga 475
Query: 361 atcaattttgctattttttcacagcatgcaactacagtcacactttgtttagtccttcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atcaattttgctattttttcacagcatgcaactacagtcacactttgtttagtccttcct 535
Query: 421 gagaatggaagcattggtactctagacggtggcatgatagaactgcctttggatccttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gagaatggaagcattggtactctagacggtggcatgatagaactgcctttggatccttcc 595
Query: 481 ttgaacaaaacaggggacgtttggcacatttgtattgaggatcttccatgtagcaaggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttgaacaaaacaggggacgtttggcacatttgtattgaggatcttccatgtagcaaggtt 655
Query: 541 ctatatggatatcgtatcgatggagctcacgactggagtaaagggcatcggtttgacagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctatatggatatcgtatcgatggagctcacgactggagtaaagggcatcggtttgacagc 715
Query: 601 agcattgtgcttgttgatccttatgcaaaattaatcg 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 716 agcattgtgcttgttgatccttatgcaaaattaatcg 752
>gnl|LJGI|GO035993 similar to UniRef100_A4PIT0 Cluster: Isoamylase-type
starch-debranching enzyme 3; n=1; Phaseolus
vulgaris|Rep: Isoamylase-type starch-debranching enzyme
3 - Phaseolus vulgaris (Kidney bean) (French bean),
partial (20%)
Length = 782
Score = 1086 bits (548), Expect = 0.0
Identities = 571/575 (99%), Gaps = 4/575 (0%)
Strand = Plus / Plus
Query: 97 tcacttgccggaaactcgttttgccgtgaaatcaggttgaagttcatgaagcaagcttcg 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tcacttgccggaaactcgttttgccgtgaaatcaggttgaagttcatgaagcaagcttcg 234
Query: 157 ggaagcaaatcgaatcataatggtcgcggagtttatagtgagacaacggaccgcgccaag 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ggaagcaaatcgaatcataatggtcgcggagtttatagtgagacaacggaccgcgccaag 294
Query: 217 cttaggacaactaatgtttatagtggtcgtgctcaggaaggggtgcttgaggaagatgtc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cttaggacaactaatgtttatagtggtcgtgctcaggaaggggtgcttgaggaagatgtc 354
Query: 277 tccaaagtgatagagaacagaccaacatgggaaatttccccaggacaggcagttccattg 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tccaaagtgatagagaacagaccaacatgggaaatttccccaggacaggcagttccattg 414
Query: 337 ggtgtatcacaagttgacaatggaatcaattttgctattttttcacagcatgcaactaca 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggtgtatcacaagttgacaatggaatcaattttgctattttttcacagcatgcaactaca 474
Query: 397 gtcacactttgtttagtccttcctgagaatggaagcattggtactctagacggtggcatg 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gtcacactttgtttagtccttcctgagaatggaagcattggtactctagacggtggcatg 534
Query: 457 atagaactgcctttggatccttccttgaacaaaacaggggacgtttggcacatttgtatt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atagaactgcctttggatccttccttgaacaaaacaggggacgtttggcacatttgtatt 594
Query: 517 gaggatcttccatgtagcaaggttctatatggatatcgtatcgatggagctcacgactgg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaggatcttccatgtagcaaggttctatatggatatcgtatcgatggagctcacgactgg 654
Query: 577 agtaaagggcatcggtttgacagcagcattgtgcttgttgatccttatgcaaaattaatc 636
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 655 agtaaagggcatcggtttgacagcagcattgtgcttgttgatccttatgc-aaattaatc 713
Query: 637 gaaggtcgaaggaattttggggatattagcatgag 671
||| ||||||| ||||||||||||||||||||||
Sbjct: 714 gaa-gtcgaag--attttggggatattagcatgag 745
Score = 91.7 bits (46), Expect = 2e-17
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 1 atgcttcaccacccattactctgcggttccagacccgccactcact 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgcttcaccacccattactctgcggttccagacccgccactcact 179
>gnl|LJGI|TC69421 similar to UniRef100_A4PIT0 Cluster: Isoamylase-type
starch-debranching enzyme 3; n=1; Phaseolus
vulgaris|Rep: Isoamylase-type starch-debranching enzyme
3 - Phaseolus vulgaris (Kidney bean) (French bean),
partial (11%)
Length = 644
Score = 842 bits (425), Expect = 0.0
Identities = 425/425 (100%)
Strand = Plus / Plus
Query: 1 atgcttcaccacccattactctgcggttccagacccgccactcactccacactcttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgcttcaccacccattactctgcggttccagacccgccactcactccacactcttcgct 186
Query: 61 tcgcttttctccgacggcaacaacgccggtcgcagttcacttgccggaaactcgttttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcgcttttctccgacggcaacaacgccggtcgcagttcacttgccggaaactcgttttgc 246
Query: 121 cgtgaaatcaggttgaagttcatgaagcaagcttcgggaagcaaatcgaatcataatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cgtgaaatcaggttgaagttcatgaagcaagcttcgggaagcaaatcgaatcataatggt 306
Query: 181 cgcggagtttatagtgagacaacggaccgcgccaagcttaggacaactaatgtttatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cgcggagtttatagtgagacaacggaccgcgccaagcttaggacaactaatgtttatagt 366
Query: 241 ggtcgtgctcaggaaggggtgcttgaggaagatgtctccaaagtgatagagaacagacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggtcgtgctcaggaaggggtgcttgaggaagatgtctccaaagtgatagagaacagacca 426
Query: 301 acatgggaaatttccccaggacaggcagttccattgggtgtatcacaagttgacaatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acatgggaaatttccccaggacaggcagttccattgggtgtatcacaagttgacaatgga 486
Query: 361 atcaattttgctattttttcacagcatgcaactacagtcacactttgtttagtccttcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atcaattttgctattttttcacagcatgcaactacagtcacactttgtttagtccttcct 546
Query: 421 gagaa 425
|||||
Sbjct: 547 gagaa 551