Miyakogusa Predicted Gene
- Lj1g3v1514800.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1514800.2 tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase
OS=Medicago truncatula GN=MTR_3g099470 PE=4
SV=1,84.66,0,TRNASYNTHSER,Serine-tRNA ligase, type1;
tRNA-synt_2b,Aminoacyl-tRNA synthetase, class II (G/ H/ P/
S,CUFF.27429.2
(1542 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77983 similar to UniRef100_Q944K1 Cluster: At1g11870/... 1624 0.0
gnl|LJGI|TC80515 similar to UniRef100_A7R7W1 Cluster: Chromosome... 1378 0.0
gnl|LJGI|BP067530 similar to UniRef100_Q944K1 Cluster: At1g11870... 176 3e-43
>gnl|LJGI|TC77983 similar to UniRef100_Q944K1 Cluster: At1g11870/F12F1_29; n=1;
Arabidopsis thaliana|Rep: At1g11870/F12F1_29 -
Arabidopsis thaliana (Mouse-ear cress), partial (54%)
Length = 1123
Score = 1624 bits (819), Expect = 0.0
Identities = 884/900 (98%), Gaps = 6/900 (0%)
Strand = Plus / Plus
Query: 643 ctccaactgggaaaggatcttgatctctttgattttgatgctgctgcagaggttagtggg 702
|||||||||| ||||||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 1 ctccaactgg-aaaggatct-gatctctt-gactttgatgctactgcagaggttagtggg 57
Query: 703 tcaaagttctactacctgaaaaatgaagcggttttgttagagatggctcttttaaattgg 762
||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 58 tcaaagttctactac-tgaaaa-tgaagcggttt-gttagagatggctcttttaaattgg 114
Query: 763 acactctcagaagtgatgaaaagaggctttactcctataacaactcctgaaattgtacgg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 acactctcagaagtgatgaaaagaggctttactcctataacaactcctgaaattgtacgg 174
Query: 823 tcctctgttgttgaaaaatgtgggttccaacctcgtgcggataatacccagatttattcc 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tcctctgttgttgaaaaatgtgggttccaacctcgtgcggataatacccagatttattcc 234
Query: 883 atcgaagacagtgaccaatgccttattggcactgcagagattcctgttgggggccttcat 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 atcgaagacagtgaccaatgccttattggcactgcagagattcctgttgggggccttcat 294
Query: 943 atggattctattcttgctgactcattgttacccttaaaatatgtggcattttctcattgt 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atggattctattcttgctgactcattgttacccttaaaatatgtggcattttctcattgt 354
Query: 1003 ttccgtaccgaggcaggtgctgctggcgctgcaacaaggggtctttatcgagttcaccag 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ttccgtaccgaggcaggtgctgctggcgctgcaacaaggggtctttatcgagttcaccag 414
Query: 1063 ttcagcaaggttgaaatgtttgttttttgccgtccggaagagagtgaatattatcatcaa 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttcagcaaggttgaaatgtttgttttttgccgtccggaagagagtgaatattatcatcaa 474
Query: 1123 gagctcattaaaattgaagaagacatcttctcatcccttgggttacattttaaaattttg 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gagctcattaaaattgaagaagacatcttctcatcccttgggttacattttaaaattttg 534
Query: 1183 gatatggcttctgaagatttaggtgcacccgcttatcgtaaatccgatgtggaggcatgg 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gatatggcttctgaagatttaggtgcacccgcttatcgtaaatccgatgtggaggcatgg 594
Query: 1243 atgccaggtttagaacggtttggtgagatctcaagcgcatcaaattgcacagactatcag 1302
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 595 atgccaggtttagaacggtttggtgagatctcaagcgcatccaattgcacagactatcag 654
Query: 1303 agccgtcggttgggaatccggtatcgtccatcagaagcacttgcacctggtccnnnnnnn 1362
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agccgtcggttgggaatccggtatcgtccatcagaagcacttgcacctggtccaaaaaaa 714
Query: 1363 tctaaaggcaaccttgctccaccacagtttgtccacacattaaatgcaacagcatgtgca 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tctaaaggcaaccttgctccaccacagtttgtccacacattaaatgcaacagcatgtgca 774
Query: 1423 gtaccgcggatgattatatgcttacttgagaattaccaacaagaagatgggtctgttctt 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gtaccgcggatgattatatgcttacttgagaattaccaacaagaagatgggtctgttctt 834
Query: 1483 atccctgagcccttgaggcctttcatggggggccttaacattatagctagaaaatcataa 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 atccctgagcccttgaggcctttcatggggggccttaacattatagctagaaaatcataa 894
>gnl|LJGI|TC80515 similar to UniRef100_A7R7W1 Cluster: Chromosome undetermined
scaffold_2065, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_2065,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (53%)
Length = 729
Score = 1378 bits (695), Expect = 0.0
Identities = 715/719 (99%), Gaps = 2/719 (0%)
Strand = Plus / Plus
Query: 1 atgggtttacacggttgcctcaacatcacaaccttacaaagtttcaagctcggtgcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 atgggtttacacggttgcctcaacatcacaaccttacaaagtttcaagctcggtgcattt 72
Query: 61 cgcacttacccatcttcacaccaaagaaccaaagctccattcctttattcgcagaaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgcacttacccatcttcacaccaaagaaccaaagctccattcctttattcgcagaaacca 132
Query: 121 tcattgccacgacccatcaaagctctctccacctccgccgccgccgttgaaacatccccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcattgccacgacccatcaaagctctctccacctccgccgccgccgttgaaacatccccg 192
Query: 181 tcaacaactgagacttccgacgaaaagggtgggaagcctcaatggaaagcaacaatagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcaacaactgagacttccgacgaaaagggtgggaagcctcaatggaaagcaacaatagac 252
Query: 241 ttcaagtggataaaggataacaaggaagctgttgctgccaatataaggaaccgcaactct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttcaagtggataaaggataacaaggaagctgttgctgccaatataaggaaccgcaactct 312
Query: 301 catgctaatttggaccttgtgctccacctgtatgacagcatgtttcaccttcagaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 catgctaatttggaccttgtgctccacctgtatgacagcatgtttcaccttcagaaggaa 372
Query: 361 gttgagagggttcgtggagagagaaatgcagtagctaataaaatgaaaggaaaaatagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gttgagagggttcgtggagagagaaatgcagtagctaataaaatgaaaggaaaaatagaa 432
Query: 421 ccatctgagcgccagagattaattgaagaagggaagaaattgaaagaggggcttattgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccatctgagcgccagagattaattgaagaagggaagaaattgaaagaggggcttattgct 492
Query: 481 ttggaagaagacctggtgaagcttaaagatgagcttcaacaggaagcgcagtctatacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttggaagaagacctggtgaagcttaaagatgagcttcaacaggaagcgcagtctatacca 552
Query: 541 aatattactcatcctgatgttccgataggaggggaggattgttccactataataaagatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aatattactcatcctgatgttccgataggaggggaggattgttccactataataaagatg 612
Query: 601 gttggcagcgctcccaaatttagctttcctgtcaaagatcatctccaactgggaaaggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gttggcagcgctcccaaatttagctttcctgtcaaagatcatctccaactgggaaaggat 672
Query: 661 cttgatctctttgattttgatgctgctgcagaggttagtgggtcaaagttctactacct 719
|||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 673 cttgatctctttgactttgatgctactgcaga-gttagtgggtc-aagttctactacct 729
>gnl|LJGI|BP067530 similar to UniRef100_Q944K1 Cluster: At1g11870/F12F1_29; n=1;
Arabidopsis thaliana|Rep: At1g11870/F12F1_29 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 363
Score = 176 bits (89), Expect = 3e-43
Identities = 171/188 (90%), Gaps = 9/188 (4%)
Strand = Plus / Minus
Query: 1363 tctaaaggcaaccttgctccacc--acagtttgtcc-acaca-ttaaatgcaacagcatg 1418
||||||||||||| ||||||||| |||| ||||| ||||| |||||||||||||||||
Sbjct: 363 tctaaaggcaacc-tgctccacccaccagtctgtcctacacacttaaatgcaacagcatg 305
Query: 1419 tgcagt-accgc-ggatgattatatgcttacttgagaattaccaacaagaagatgggtct 1476
|||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 304 tgcagtcaccgctggatgattatatgcttacttgagaattaccaagcagaagatgggtct 245
Query: 1477 gttcttatccctgagcccttga-ggcctttcatggggggccttaaca-ttatagctagaa 1534
|||||||||||||||||||||| | |||||| ||||||||| | ||| ||||||||||||
Sbjct: 244 gttcttatccctgagcccttgacgccctttcctggggggccgtgacacttatagctagaa 185
Query: 1535 aatcataa 1542
||||||||
Sbjct: 184 aatcataa 177