Miyakogusa Predicted Gene
- Lj1g3v1501530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1501530.1 Non Chatacterized Hit- tr|I1GU71|I1GU71_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,50.98,4e-18,coiled-coil,NULL; seg,NULL,CUFF.27417.1
(483 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62551 similar to UniRef100_A7PHJ1 Cluster: Chromosome... 950 0.0
gnl|LJGI|FS362732 similar to UniRef100_A7PHJ1 Cluster: Chromosom... 553 e-157
gnl|LJGI|BP064584 similar to UniRef100_A7PHJ1 Cluster: Chromosom... 52 3e-06
>gnl|LJGI|TC62551 similar to UniRef100_A7PHJ1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 912
Score = 950 bits (479), Expect = 0.0
Identities = 482/483 (99%)
Strand = Plus / Plus
Query: 1 atgtctttgattggtcctctccctcctcttgcctcaaacaccattcccaaactgaaaacc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atgtctttgattggtcctctccctcctcttgcctcaaacaccattcccaaactgaaaaca 203
Query: 61 atcaatccaagcattggaaccaagttcctacctaatctgctctctctggctcttgcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atcaatccaagcattggaaccaagttcctacctaatctgctctctctggctcttgcagtg 263
Query: 121 accttaacctctccactaccttcttctgcaatcccttcactcaattctcaacctccttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 accttaacctctccactaccttcttctgcaatcccttcactcaattctcaacctccttca 323
Query: 181 acctctctcaccactccattttctcaagccaagaacttgaaggttggactggaaaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acctctctcaccactccattttctcaagccaagaacttgaaggttggactggaaaatgga 383
Query: 241 aaaattagaacttgtccatcaatcaatccgggttgtatatcatccaatcccaagtcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaattagaacttgtccatcaatcaatccgggttgtatatcatccaatcccaagtcatca 443
Query: 301 tcgtttgcgtttccttggctgattcctgaaaattcgttggataaccccattcagaaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcgtttgcgtttccttggctgattcctgaaaattcgttggataaccccattcagaaactg 503
Query: 361 cgtgaagcaattctaaagacccagaaaaatgtgaagttcctacttgtggaagacacccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgtgaagcaattctaaagacccagaaaaatgtgaagttcctacttgtggaagacacccca 563
Query: 421 gatggccaatatatgcaagctgaagttgatgcaggatttgatagagatgtgcttgagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gatggccaatatatgcaagctgaagttgatgcaggatttgatagagatgtgcttgagttt 623
Query: 481 ctg 483
|||
Sbjct: 624 ctg 626
>gnl|LJGI|FS362732 similar to UniRef100_A7PHJ1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 597
Score = 553 bits (279), Expect = e-157
Identities = 279/279 (100%)
Strand = Plus / Minus
Query: 205 caagccaagaacttgaaggttggactggaaaatggaaaaattagaacttgtccatcaatc 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 caagccaagaacttgaaggttggactggaaaatggaaaaattagaacttgtccatcaatc 538
Query: 265 aatccgggttgtatatcatccaatcccaagtcatcatcgtttgcgtttccttggctgatt 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aatccgggttgtatatcatccaatcccaagtcatcatcgtttgcgtttccttggctgatt 478
Query: 325 cctgaaaattcgttggataaccccattcagaaactgcgtgaagcaattctaaagacccag 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cctgaaaattcgttggataaccccattcagaaactgcgtgaagcaattctaaagacccag 418
Query: 385 aaaaatgtgaagttcctacttgtggaagacaccccagatggccaatatatgcaagctgaa 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaaaatgtgaagttcctacttgtggaagacaccccagatggccaatatatgcaagctgaa 358
Query: 445 gttgatgcaggatttgatagagatgtgcttgagtttctg 483
|||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gttgatgcaggatttgatagagatgtgcttgagtttctg 319
>gnl|LJGI|BP064584 similar to UniRef100_A7PHJ1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 504
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 426 ccaatatatgcaagctgaagttgatgcaggatttgatagagatgtgcttgagtttctg 483
||||||| || ||| |||| |||||| | ||||||||||||| ||||| |||||||||
Sbjct: 431 ccaatatctggaagttgaacttgatggacgatttgatagagacgtgctcgagtttctg 374