Miyakogusa Predicted Gene
- Lj1g3v1499460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1499460.1 tr|B9PDP4|B9PDP4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_585654 PE=4
SV=1,53.73,0.0000000002, ,CUFF.27408.1
(750 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61618 weakly similar to UniRef100_A7PHI4 Cluster: Chr... 870 0.0
gnl|LJGI|TC57473 similar to UniRef100_A7PHI4 Cluster: Chromosome... 371 e-102
>gnl|LJGI|TC61618 weakly similar to UniRef100_A7PHI4 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 892
Score = 870 bits (439), Expect = 0.0
Identities = 456/464 (98%)
Strand = Plus / Plus
Query: 287 tctcaaacggggtttcaactgtgggtgctagatacaaggcagtttcagttaaaacaaact 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tctcaaacggggtttcaactgtgggtgctagatacaaggcagtttcagttaaaacaaact 62
Query: 347 ttgatgattgttctacctggctaactgctaggagggaagggcagcaggaacttcttgatg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ttgatgattgttctacctggctaactgctaggagggaagggcagcaggaacttcttgatg 122
Query: 407 gtcagagtattctacttgagattaacgattcgctagagaatcagatcgagtctccagagt 466
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtcggagtattctacttgagattaacgattcgctagagaatcagatcgagtctccagagt 182
Query: 467 tgtacattggggtaattaaacataggaaattctccattggagcagagaagccaatgccaa 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgtacattggggtaattaaacataggaaattctccattggagcagagaagccaatgccaa 242
Query: 527 gaacgtctattgcatatcatggagttgtaggaggtgatgaagagtatctatatgttgatg 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gaacgtctattgcatatcatggagttgtaggaggtgatgaagagtatctatatgttgatg 302
Query: 587 gaattggcatcaaaacaggagatatctttcagttctaccattcagatcctaaagcagcgt 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gaattggcatcaaaacaggagatatctttcagttctaccattcagatcctaaagcagcgt 362
Query: 647 taggttcattaacagaggtccatgatgccctcaacaatattaagctggnnnnnnnttcta 706
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 363 taggttcattaacagaggtccatgatgccctcaacaatattaagctggaaaaaaattcta 422
Query: 707 ggaggttcatgtgtgatggagacaatggtgttaatgttttcggg 750
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggaggttcatgtgtgatggagacaatggtgttaatgttttcggg 466
>gnl|LJGI|TC57473 similar to UniRef100_A7PHI4 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 844
Score = 371 bits (187), Expect = e-102
Identities = 187/187 (100%)
Strand = Plus / Plus
Query: 1 atggatatcaaggaatattcggcctctgtctccagttgcaaattccctgttgggattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atggatatcaaggaatattcggcctctgtctccagttgcaaattccctgttgggattata 717
Query: 61 ctgtttggagaatcaagcagtgacatgaaactggttctggagaagttggactatgccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ctgtttggagaatcaagcagtgacatgaaactggttctggagaagttggactatgccatg 777
Query: 121 ccgatggacacaatcattgtgggtgatgagcgaggctcctttgtatactgcagtggaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ccgatggacacaatcattgtgggtgatgagcgaggctcctttgtatactgcagtggaaat 837
Query: 181 gattcta 187
|||||||
Sbjct: 838 gattcta 844