Miyakogusa Predicted Gene

Lj1g3v1497420.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1497420.1 Non Chatacterized Hit- tr|F2R0S4|F2R0S4_STRVP
Uncharacterized protein OS=Streptomyces venezuelae (st,27.78,0.038,
,CUFF.27403.1
         (336 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64190                                                       84   6e-16
gnl|LJGI|FS321858 UniRef100_Q8N773 Cluster: CDNA FLJ25969 fis  c...    72   2e-12

>gnl|LJGI|TC64190 
          Length = 1108

 Score = 83.8 bits (42), Expect = 6e-16
 Identities = 57/61 (93%), Gaps = 2/61 (3%)
 Strand = Plus / Plus

                                                                       
Query: 232 tgtcccgtcatgtatgacgttataagtggcgatgaggaggtgtgtcctatcattgtcccg 291
           ||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tgtcccgtcttgtgtgacg--ataagtggcgatgaggaggtgtgtcctatcattgtcccg 345

            
Query: 292 t 292
           |
Sbjct: 346 t 346



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 254 taagtggcgatgaggaggtgtgtcctatcattgtcccgt 292
           ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 257 taagtggcgatcaggaggtgtgtcctatgattgtcccgt 295



 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 266 aggaggtgtgtcctatcattgtccc 290
           |||||||||||||||||||||||||
Sbjct: 216 aggaggtgtgtcctatcattgtccc 240


>gnl|LJGI|FS321858 UniRef100_Q8N773 Cluster: CDNA FLJ25969 fis  clone CBR02250; n=1;
           Homo sapiens|Rep: CDNA FLJ25969 fis  clone, partial (6%)
          Length = 771

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 255 aagtggcgatgaggaggtgtgtcctatcattgtccc 290
           ||||||||||||||||||||||||||||||||||||
Sbjct: 631 aagtggcgatgaggaggtgtgtcctatcattgtccc 666



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 254 taagtggcgatgaggaggtgtgtcctatcattgtccc 290
           ||||||||||| |||||||||||||||| ||||||||
Sbjct: 681 taagtggcgatcaggaggtgtgtcctatgattgtccc 717



 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 254 taagtggcgatgaggaggtgtgtcctatcattgtcccgt 292
           ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 732 taagtggcgatcaggaggtgtgttctatgattgtcccgt 770