Miyakogusa Predicted Gene
- Lj1g3v1464140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1464140.1 Non Chatacterized Hit- tr|C5WSW0|C5WSW0_SORBI
Putative uncharacterized protein Sb01g001150
OS=Sorghu,78.57,1e-18,SAM_DOMAIN,Sterile alpha motif domain;
SAM_1,Sterile alpha motif, type 1; STERILE ALPHA MOTIF (SAM)
,NODE_46709_length_1424_cov_20.514748.path2.1
(754 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73142 similar to UniRef100_A7PHP2 Cluster: Chromosome... 1045 0.0
gnl|LJGI|TC79042 similar to UniRef100_A7QUQ7 Cluster: Chromosome... 145 5e-34
gnl|LJGI|TC77309 similar to UniRef100_A7QUQ7 Cluster: Chromosome... 64 1e-09
>gnl|LJGI|TC73142 similar to UniRef100_A7PHP2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 725
Score = 1045 bits (527), Expect = 0.0
Identities = 573/596 (96%)
Strand = Plus / Plus
Query: 1 atgacggaggttccggcaccggaggcgcaattgaccggcggagtaacggtggcgcccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atgacggaggttccggcaccggaggcgcaattgaccggcggagtaacggtggcgcccaac 189
Query: 61 aaaccctccgaacccactgccactggatcgaagcgccaccggagacccagcgtccgatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aaaccctccgaacccactgccactggatcgaagcgccaccggagacccagcgtccgatta 249
Query: 121 ggcgagatcggagaccaacccaacgattcccaccctctccgccgnnnnnnnnnnnnnnnn 180
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggcgagatcggagaccaacccaacgattcccaccctctccgccgcaccaccaccaccacc 309
Query: 181 nnnnnnnagtcgtcgtggcgcctccccttctccaacgcctcaggtaaacattccaagact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 accaccaagtcgtcgtggcgcctccccttctccaacgcctcaggtaaacattccaagact 369
Query: 241 cgacctctcaccaacttgaccggtttcggcggaaccctagagggcgacgacgacgacgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cgacctctcaccaacttgaccggtttcggcggaaccctagagggcgacgacgacgacgtc 429
Query: 301 gttcgctggaaactgaaggactccaagaagaggggttcttcctcctccgccgccgccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gttcgctggaaactgaaggactccaagaagaggggttcttcctcctccgccgccgccaag 489
Query: 361 agaccccgatcgaattgggttgcttcttcccaaatcgagggagaggatttcgatgcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 agaccccgatcgaattgggttgcttcttcccaaatcgagggagaggatttcgatgcagag 549
Query: 421 agccctgttcttcattcagcggagaatttgggtgatgacgacgacgacgatgatgattat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agccctgttcttcattcagcggagaatttgggtgatgacgacgacgacgatgatgattat 609
Query: 481 agagcgacgctgcagcattatcatgaggagaatgctagggataataagaatgggaatggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agagcgacgctgcagcattatcatgaggagaatgctagggataataagaatgggaatggt 669
Query: 541 ggaggagtgaggcatggagaagattggattcggatttggctcaatgggctaggctt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ggaggagtgaggcatggagaagattggattcggatttggctcaatgggctaggctt 725
>gnl|LJGI|TC79042 similar to UniRef100_A7QUQ7 Cluster: Chromosome chr1 scaffold_180,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_180, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 859
Score = 145 bits (73), Expect = 5e-34
Identities = 163/193 (84%)
Strand = Plus / Plus
Query: 559 gaagattggattcggatttggctcaatgggctaggcttaggtagatatgctccagttttt 618
|||||| || || ||||||||||||||||| | || ||||| | ||||| || || |||
Sbjct: 354 gaagatggggttaggatttggctcaatgggttggggttagggcgttatgcgccggtgttt 413
Query: 619 gaaatccatgagattgatgatgaggttttgcacttgctaactcttgaggatcttaaagat 678
||| | |||||| |||||||||||||||||| | || | || || |||||||| ||||||
Sbjct: 414 gaagtgcatgaggttgatgatgaggttttgcccatgttgacactagaggatctcaaagat 473
Query: 679 atggggattaatgctgttggatcaagaaggaaattgtactgtgcaattcagaagcttggc 738
|||||||||| |||||||||||| || || ||| |||||||||| ||||||||||||||
Sbjct: 474 atggggattagtgctgttggatccaggagaaaaatgtactgtgctattcagaagcttgga 533
Query: 739 aagggtttctcct 751
||||| |||||||
Sbjct: 534 aagggcttctcct 546
>gnl|LJGI|TC77309 similar to UniRef100_A7QUQ7 Cluster: Chromosome chr1 scaffold_180,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_180, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 1141
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 664 gaggatcttaaagatatggggattaatgctgttggatcaagaaggaaattgtactgtgca 723
|||||||| || |||||||| || ||||||||||| || |||||||| ||||| ||||
Sbjct: 642 gaggatctcaaggatatgggtataaatgctgttggttccagaaggaagatgtacactgca 701
Query: 724 attcagaagctt 735
||||||||||||
Sbjct: 702 attcagaagctt 713